RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 C5orf42Q9H799 3197 aa9.87□□□□□ -0.83
SCFD1-202ENST00000396629 TBX10O75333 385 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 RGS20O76081 388 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 EYA4O95677 639 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 FGAP02671 866 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 GOLGA8HP0CJ92 632 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 CTNNB1P35222 781 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 ADAM15Q13444 863 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 HSDL1Q3SXM5 330 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 FAM26DQ5JW98 314 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 CLP1Q92989 425 aaKnown RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 MSLNLQ96KJ4 702 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 SPATA33Q96N06 139 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 C11orf84Q9BUA3 381 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 IFIH1Q9BYX4 1025 aaKnown RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 ALG13Q9NP73 1137 aaKnown RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 MRPL11Q9Y3B7 192 aaKnown RBP9.86□□□□□ -0.83
SCFD1-202ENST00000396629 ZMYM6O95789 1325 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 PLXNA3P51805 1871 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 KAT6AQ92794 2004 aa9.86□□□□□ -0.83
SCFD1-202ENST00000396629 LOC730098B7Z3J9 87 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 TREHO43280 583 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 HSPD1P10809 573 aaKnown RBP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 ZXDAP98168 799 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 GHRHRQ02643 423 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 RC3H2Q9HBD1 1191 aaKnown RBP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 HELLSQ9NRZ9 838 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 LINC01565O15544 149 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 GGPS1O95749 300 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 MMP1P03956 469 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 SMIM10L2AP0DMW4 78 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 SMIM10L2BP0DMW5 78 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 PCP11498 1178 aaKnown RBP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 HSD17B4P51659 736 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 TTC3P53804 2025 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 SP2Q02086 613 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 CBX2Q14781 532 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 FBXL6Q8N531 539 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 OTUD7AQ8TE49 926 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-202ENST00000396629 PDCD2LQ9BRP1 358 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 RNPEPQ9H4A4 650 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 DOCK5Q9H7D0 1870 aa9.85□□□□□ -0.83
SCFD1-202ENST00000396629 H3BRB1 525 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 OPLAHO14841 1288 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 TGFB3P10600 412 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 FOXK2Q01167 660 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 QRICH1Q2TAL8 776 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 VSIG10LQ86VR7 867 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 DGKHQ86XP1 1220 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 SUGP1Q8IWZ8 645 aaKnown RBP9.84□□□□□ -0.83
SCFD1-202ENST00000396629 ZNF689Q96CS4 500 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-202ENST00000396629 IGFLR1Q9H665 355 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 TUT1Q9H6E5 874 aaKnown RBP9.84□□□□□ -0.83
SCFD1-202ENST00000396629 ADGRA3Q8IWK6 1321 aa9.84□□□□□ -0.83
SCFD1-202ENST00000396629 SORBS3O60504 671 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 GFRA3O60609 400 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 CTSHP09668 335 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 UBA1P22314 1058 aaKnown RBP9.83□□□□□ -0.84
SCFD1-202ENST00000396629 ADAM17P78536 824 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 CAMK1Q14012 370 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 MFSD6Q6ZSS7 791 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 STOX1Q6ZVD7 989 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 MIER1Q8N108 512 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 PLVAPQ9BX97 442 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 MAP3K20Q9NYL2 800 aaKnown RBP9.83□□□□□ -0.84
SCFD1-202ENST00000396629 USP34Q70CQ2 3546 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 SALL3Q9BXA9 1300 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 LAMA4Q16363 1823 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 CFBP00751 764 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 LGALS2P05162 132 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 GNAT1P11488 350 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 MYCLP12524 364 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-202ENST00000396629 COASYQ13057 564 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 ASPRV1Q53RT3 343 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 SAMD3Q8N6K7 520 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 PNMA1Q8ND90 353 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 P2RX5Q93086 422 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 IRF2BPLQ9H1B7 796 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 EHMT1Q9H9B1 1298 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 JMJD4Q9H9V9 463 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 CLEC1BQ9P126 229 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 PLAGL2Q9UPG8 496 aa9.83□□□□□ -0.84
SCFD1-202ENST00000396629 ENPP3O14638 875 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 MX1P20591 662 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 NDUFV1P49821 464 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 RRP1P56182 461 aaKnown RBP9.82□□□□□ -0.84
SCFD1-202ENST00000396629 HAND2P61296 217 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 SIGLEC14Q08ET2 396 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 PGM5Q15124 567 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 MCMDC2Q4G0Z9 681 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 NAALADL2Q58DX5 795 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 CCDC178Q5BJE1 867 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 TBC1D10CQ8IV04 446 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 EFHBQ8N7U6 833 aa9.82□□□□□ -0.84
SCFD1-202ENST00000396629 SMRP1Q8NCR6 262 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms