RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.37
HOXA3-202ENST00000396352 LY75O60449 1722 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 ANKRD65E5RJM6 399 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 AKR1B1P15121 316 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 MARSP56192 900 aaKnown RBP17.33■□□□□ 0.36
HOXA3-202ENST00000396352 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
HOXA3-202ENST00000396352 NAB2Q15742 525 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 CFAP221Q4G0U5 840 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 CEP63Q96MT8 703 aa17.33■□□□□ 0.36
HOXA3-202ENST00000396352 CCNL1Q9UK58 526 aaPredicted RBP17.33■□□□□ 0.36
HOXA3-202ENST00000396352 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 PALMO75781 387 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 GLI1P08151 1106 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 POLR2FP61218 127 aaKnown RBP17.32■□□□□ 0.36
HOXA3-202ENST00000396352 ALS2CLQ60I27 953 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 GDF3Q9NR23 364 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 ARL8AQ96BM9 186 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 EHD4Q9H223 541 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 TBC1D7Q9P0N9 293 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 RNF14Q9UBS8 474 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
HOXA3-202ENST00000396352 MYH4Q9Y623 1939 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 KLRC1P26715 233 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 ZNF543Q08ER8 600 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 NNTQ13423 1086 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 DNAJC21Q5F1R6 531 aaKnown RBP17.32■□□□□ 0.36
HOXA3-202ENST00000396352 CAPS2Q9BXY5 557 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 KCTD10Q9H3F6 313 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 KANSL2Q9H9L4 492 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
HOXA3-202ENST00000396352 OPA1O60313 960 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 GBP6Q6ZN66 633 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 ZSCAN5CA6NGD5 496 aaPredicted RBP17.31■□□□□ 0.36
HOXA3-202ENST00000396352 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 NAP1L1P55209 391 aaKnown RBP17.31■□□□□ 0.36
HOXA3-202ENST00000396352 DPP8Q6V1X1 898 aaPredicted RBP17.31■□□□□ 0.36
HOXA3-202ENST00000396352 ZC3H3Q8IXZ2 948 aaKnown RBP17.31■□□□□ 0.36
HOXA3-202ENST00000396352 ZIM3Q96PE6 472 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 DAGLAQ9Y4D2 1042 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 LTBP1Q14766 1721 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 E9PMD0 336 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 FTCDO95954 541 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 TTBK2Q6IQ55 1244 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 NELFCDQ8IXH7 590 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 SCFD1Q8WVM8 642 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 TBC1D5Q92609 795 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
HOXA3-202ENST00000396352 A0A087X0T9 212 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 NPHP3-ACAD11A0A0J9YXS1 232 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 EIF3HO15372 352 aaKnown RBP eCLIP17.3■□□□□ 0.36
HOXA3-202ENST00000396352 FAM228BP0C875 321 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 CARSP49589 748 aaKnown RBP17.3■□□□□ 0.36
HOXA3-202ENST00000396352 SLF2Q8IX21 1173 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 CUL5Q93034 780 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 GANQ9H2C0 597 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 HSF2BPO75031 334 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 GNA14O95837 355 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 FAM153BP0C7A2 387 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 RFC4P35249 363 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 FAM153CQ494X1 144 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 IFT20Q8IY31 132 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
HOXA3-202ENST00000396352 PACSIN1Q9BY11 444 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 NT5C3AQ9H0P0 336 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 AIPL1Q9NZN9 384 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 FAM153AQ9UHL3 310 aa17.3■□□□□ 0.36
HOXA3-202ENST00000396352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.3■□□□□ 0.36
HOXA3-202ENST00000396352 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 PICALMQ13492 652 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 NFU1Q9UMS0 254 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 KIAA1024Q9UPX6 916 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 ESYT3A0FGR9 886 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 GRID2IPA4D2P6 1211 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 HEXIM1O94992 359 aaKnown RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 TTLL1O95922 423 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 SKOR1P84550 965 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 PACSIN2Q9UNF0 486 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-202ENST00000396352 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 CCT5P48643 541 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 GNGT1P63211 74 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 RAPGEF1Q13905 1077 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 PACS2Q86VP3 889 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 CCDC65Q8IXS2 484 aa17.29■□□□□ 0.36
HOXA3-202ENST00000396352 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms