RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PTK7Q13308 1070 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-206ENST00000395795 XRRA1Q6P2D8 792 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 LRRC8DQ7L1W4 858 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 SERINC5Q86VE9 423 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 TRIM50Q86XT4 487 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 SENP7Q9BQF6 1050 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 OSBPL7Q9BZF2 842 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 MLXIPQ9HAP2 919 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 UBIAD1Q9Y5Z9 338 aa18.62■□□□□ 0.57
CXCL12-206ENST00000395795 ZBBXA8MT70 800 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 H3BRB1 525 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 ADAMTS3O15072 1205 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 HSPA4P34932 840 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 ADAM17P78536 824 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 GNPTABQ3T906 1256 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 ZNF618Q5T7W0 954 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 TUT1Q9H6E5 874 aaKnown RBP18.61■□□□□ 0.57
CXCL12-206ENST00000395795 MSRAQ9UJ68 235 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
CXCL12-206ENST00000395795 SMIM10L2AP0DMW4 78 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 SMIM10L2BP0DMW5 78 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 NEDD9Q14511 834 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 CUL5Q93034 780 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 GPRASP2Q96D09 838 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 COL25A1Q9BXS0 654 aaPredicted RBP18.6■□□□□ 0.57
CXCL12-206ENST00000395795 RNPEPQ9H4A4 650 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 PCDHA6Q9UN73 950 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 PCDHA8Q9Y5H6 950 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 SNX14Q9Y5W7 946 aa18.6■□□□□ 0.57
CXCL12-206ENST00000395795 STXBP3O00186 592 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 ZBTB43O43298 467 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 RTN1Q16799 776 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 SPRED2Q7Z698 418 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 PHOSPHO2Q8TCD6 241 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 AGXT2Q9BYV1 514 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 PRDM6Q9NQX0 595 aa18.59■□□□□ 0.57
CXCL12-206ENST00000395795 RBM28Q9NW13 759 aaKnown RBP18.59■□□□□ 0.57
CXCL12-206ENST00000395795 V9GY48 417 aaPredicted RBP18.59■□□□□ 0.57
CXCL12-206ENST00000395795 VCANP13611 3396 aa18.58■□□□□ 0.57
CXCL12-206ENST00000395795 NID2Q14112 1375 aa18.58■□□□□ 0.57
CXCL12-206ENST00000395795 CUL9Q8IWT3 2517 aa18.58■□□□□ 0.57
CXCL12-206ENST00000395795 KLF18A0A0U1RQI7 1052 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 GSTTP1A0A1W2PQM5 241 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 EPOPA6NHQ4 379 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 TREHO43280 583 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 BAIAP3O94812 1187 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 CLK2P49760 499 aaKnown RBP18.58■□□□□ 0.56
CXCL12-206ENST00000395795 RCAN1P53805 252 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 WDR5P61964 334 aaKnown RBP18.58■□□□□ 0.56
CXCL12-206ENST00000395795 DEFB103AP81534 67 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 KRT32Q14532 448 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
CXCL12-206ENST00000395795 HERC6Q8IVU3 1022 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 FBXL16Q8N461 479 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 USP26Q9BXU7 913 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 FTOQ9C0B1 505 aaKnown RBP eCLIP18.58■□□□□ 0.56
CXCL12-206ENST00000395795 SLC28A3Q9HAS3 691 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 RIC8AQ9NPQ8 531 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 JADE2Q9NQC1 790 aa18.58■□□□□ 0.56
CXCL12-206ENST00000395795 CA3P07451 260 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 ACTN1P12814 892 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
CXCL12-206ENST00000395795 CNKSR3Q6P9H4 555 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 PGBD1Q96JS3 809 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 PCYT2Q99447 389 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
CXCL12-206ENST00000395795 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 PARNO95453 639 aaKnown RBP18.56■□□□□ 0.56
CXCL12-206ENST00000395795 TAP1Q03518 808 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 PKN1Q16512 942 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 NLRX1Q86UT6 975 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 CRYGNQ8WXF5 182 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
CXCL12-206ENST00000395795 LCHNA4D1U4 455 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 NOP56O00567 594 aaKnown RBP18.55■□□□□ 0.56
CXCL12-206ENST00000395795 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
CXCL12-206ENST00000395795 SP4Q02446 784 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 UTP14CQ5TAP6 766 aaKnown RBP18.55■□□□□ 0.56
CXCL12-206ENST00000395795 PPP2R2DQ66LE6 453 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 SYNE3Q6ZMZ3 975 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 Q6ZUG5 572 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 LMBR1Q8WVP7 490 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 ATP6V0A1Q93050 837 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 JAKMIP1Q96N16 626 aaKnown RBP18.55■□□□□ 0.56
CXCL12-206ENST00000395795 TMEM260Q9NX78 707 aa18.55■□□□□ 0.56
CXCL12-206ENST00000395795 RFXAPO00287 272 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 ARP10275 920 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms