RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 POLR3EQ9NVU0 708 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 ATP11BQ9Y2G3 1177 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 TDP2O95551 362 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 ZNF286BP0CG31 522 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 CUL4AQ13619 759 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 SNX17Q15036 470 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 NIPA1Q7RTP0 329 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 FBXO18Q8NFZ0 1043 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 LENG9Q96B70 501 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 SMC3Q9UQE7 1217 aa22.65■■□□□ 1.22
SNCA-203ENST00000394986 K7ELQ4 463 aaPredicted RBP22.64■■□□□ 1.21
SNCA-203ENST00000394986 USP11P51784 963 aa22.64■■□□□ 1.21
SNCA-203ENST00000394986 CHMP4BP1P59074 171 aa22.64■■□□□ 1.21
SNCA-203ENST00000394986 GRIN2DO15399 1336 aa22.64■■□□□ 1.21
SNCA-203ENST00000394986 ELP1O95163 1332 aa22.64■■□□□ 1.21
SNCA-203ENST00000394986 MYH7BA7E2Y1 1941 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 A0A0U1RQG5 324 aaPredicted RBP22.63■■□□□ 1.21
SNCA-203ENST00000394986 NOP56O00567 594 aaKnown RBP22.63■■□□□ 1.21
SNCA-203ENST00000394986 MAFGO15525 162 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 EVI5O60447 810 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 CABYRO75952 493 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 DGKDQ16760 1214 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 LETM2Q2VYF4 491 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 GPR20Q99678 358 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 MTG1Q9BT17 334 aaPredicted RBP22.63■■□□□ 1.21
SNCA-203ENST00000394986 FOXD4L1Q9NU39 408 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.63■■□□□ 1.21
SNCA-203ENST00000394986 ALPK3Q96L96 1907 aa22.63■■□□□ 1.21
SNCA-203ENST00000394986 DDX39AO00148 427 aaKnown RBP22.62■■□□□ 1.21
SNCA-203ENST00000394986 HOXD8P13378 290 aaPredicted RBP22.62■■□□□ 1.21
SNCA-203ENST00000394986 SETQ01105 290 aaPredicted RBP22.62■■□□□ 1.21
SNCA-203ENST00000394986 SAFBQ15424 915 aaKnown RBP eCLIP22.62■■□□□ 1.21
SNCA-203ENST00000394986 GIMAP8Q8ND71 665 aaPredicted RBP22.62■■□□□ 1.21
SNCA-203ENST00000394986 KAT2BQ92831 832 aa22.62■■□□□ 1.21
SNCA-203ENST00000394986 SNX21Q969T3 373 aa22.62■■□□□ 1.21
SNCA-203ENST00000394986 KIF28PB7ZC32 967 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 PQBP1O60828 265 aaKnown RBP22.61■■□□□ 1.21
SNCA-203ENST00000394986 TLE2Q04725 743 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 ITGA7Q13683 1181 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 NEK8Q86SG6 692 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 GJA10Q969M2 543 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 SDF4Q9BRK5 362 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 ZNF577Q9BSK1 485 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 JPH1Q9HDC5 661 aaPredicted RBP22.61■■□□□ 1.21
SNCA-203ENST00000394986 DNAH12Q6ZR08 3092 aa22.61■■□□□ 1.21
SNCA-203ENST00000394986 DOCK5Q9H7D0 1870 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 ARVCFO00192 962 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 IPO5O00410 1097 aaKnown RBP22.6■■□□□ 1.21
SNCA-203ENST00000394986 SLC37A4O43826 429 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 KPNA6O60684 536 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 C1orf53Q5VUE5 145 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 TRIM50Q86XT4 487 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 SLC9A2Q9UBY0 812 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 KIF3AQ9Y496 699 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 NFASCO94856 1347 aa22.6■■□□□ 1.21
SNCA-203ENST00000394986 CYP3A7-CYP3A51PA0A087WV96 503 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 WNT7AO00755 349 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 MSH4O15457 936 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 DHX15O43143 795 aaKnown RBP22.59■■□□□ 1.21
SNCA-203ENST00000394986 PPFIA4O75335 1185 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 LGALS2P05162 132 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 CYP3A7P24462 503 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 CDK7P50613 346 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 NBPF20Q3BBV1 942 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 UTP14CQ5TAP6 766 aaKnown RBP22.59■■□□□ 1.21
SNCA-203ENST00000394986 HSCBQ8IWL3 235 aa22.59■■□□□ 1.21
SNCA-203ENST00000394986 DDX25Q9UHL0 483 aaKnown RBP22.59■■□□□ 1.21
SNCA-203ENST00000394986 GSTTP1A0A1W2PQM5 241 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 CCNT1O60563 726 aaKnown RBP22.58■■□□□ 1.21
SNCA-203ENST00000394986 CCNE2O96020 404 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 TCF7P36402 384 aaPredicted RBP22.58■■□□□ 1.21
SNCA-203ENST00000394986 Q4G0T1 1027 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 SLC43A3Q8NBI5 491 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 MBOAT7Q96N66 472 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 C16orf70Q9BSU1 422 aa22.58■■□□□ 1.21
SNCA-203ENST00000394986 ZMYND8Q9ULU4 1186 aaPredicted RBP22.58■■□□□ 1.21
SNCA-203ENST00000394986 F2P00734 622 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 SYN1P17600 705 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 PSEN2P49810 448 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 GNL2Q13823 731 aaKnown RBP22.57■■□□□ 1.2
SNCA-203ENST00000394986 FAM47CQ5HY64 1035 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 MOXD1Q6UVY6 613 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 FOXP1Q9H334 677 aaPredicted RBP22.57■■□□□ 1.2
SNCA-203ENST00000394986 ATP2B1P20020 1258 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 ACTR2P61160 394 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 MFSD10Q14728 455 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 ANKRD33Q7Z3H0 272 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 FAM126BQ8IXS8 530 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 SEPT1Q8WYJ6 367 aa22.57■■□□□ 1.2
SNCA-203ENST00000394986 PRDM5Q9NQX1 630 aaPredicted RBP22.57■■□□□ 1.2
SNCA-203ENST00000394986 H0YGN5 161 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 H3BQV1 296 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 KIAA0753Q2KHM9 967 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 PPP4R3AQ6IN85 833 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 SH3RF1Q7Z6J0 888 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 NOSTRINQ8IVI9 506 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 ETNPPLQ8TBG4 499 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 SLC5A5Q92911 643 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 TRPV6Q9H1D0 765 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms