RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TRIM32Q13049 653 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 LHX8Q68G74 356 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CCDC62Q6P9F0 684 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ETNPPLQ8TBG4 499 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SLC5A5Q92911 643 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 Q9Y3F1 56 aa13.69□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 WNT7AO00755 349 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 GGPS1O95749 300 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 KCNA2P16389 499 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 KRT76Q01546 638 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SLC39A14Q15043 492 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 FERMT2Q96AC1 680 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 JPH1Q9HDC5 661 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PCDHA12Q9UN75 941 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CLIC4Q9Y696 253 aa13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SPTLC2O15270 562 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ATP9AO75110 1047 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ARIH2O95376 493 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SMPD1P17405 629 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CCND3P30281 292 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TXKP42681 527 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ITGB3BPQ13352 177 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CYFIP1Q7L576 1253 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 OR6J1Q8NGC5 347 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 HAS1Q92839 578 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ARMC5Q96C12 935 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 TTC12Q9H892 705 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SLC9A2Q9UBY0 812 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DDX20Q9UHI6 824 aaKnown RBP13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ZEB2O60315 1214 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PPP6R2O75170 966 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PSMD10O75832 226 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SFNP31947 248 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 JAK3P52333 1124 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SP2Q02086 613 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PTPAQ15257 358 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 C4orf32Q8N8J7 132 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SPATA33Q96N06 139 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 MCOLN1Q9GZU1 580 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 GNEQ9Y223 722 aaKnown RBP13.66□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 WDR64B1ANS9 1081 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DDX39AO00148 427 aaKnown RBP13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 DYNC1LI2O43237 492 aaPredicted RBP13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CCL5P13501 91 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 CPT1AP50416 773 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PDIA5Q14554 519 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms