RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SPDYE16A6NNV3 312 aaPredicted RBP16.7■□□□□ 0.26
CCT4-201ENST00000394440 RNF146Q9NTX7 359 aa16.7■□□□□ 0.26
CCT4-201ENST00000394440 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
CCT4-201ENST00000394440 UBIAD1Q9Y5Z9 338 aa16.7■□□□□ 0.26
CCT4-201ENST00000394440 CYP11B2P19099 503 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CCNE1P24864 410 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 MRPS9P82933 396 aaKnown RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 CCZ1BP86790 482 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CCZ1P86791 482 aaPredicted RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 SPAG1Q07617 926 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 ARMCX5Q6P1M9 558 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 IRF2BP1Q8IU81 584 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 HPS3Q969F9 1004 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 HSD17B14Q9BPX1 270 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 EIF2AK1Q9BQI3 630 aaKnown RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 SPTLC3Q9NUV7 552 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CSADQ9Y600 493 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 KIAA1217Q5T5P2 1943 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 GLTPD2A6NH11 291 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CCDC150Q8NCX0 1101 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CDCA5Q96FF9 252 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 ZFP91Q96JP5 570 aaPredicted RBP16.69■□□□□ 0.26
CCT4-201ENST00000394440 TAAR1Q96RJ0 339 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 CTAGE1Q96RT6 745 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 ZNF577Q9BSK1 485 aa16.69■□□□□ 0.26
CCT4-201ENST00000394440 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 PBX1P40424 430 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 PSMC6P62333 389 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 PSMD2Q13200 908 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 TBX2Q13207 712 aaPredicted RBP16.68■□□□□ 0.26
CCT4-201ENST00000394440 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
CCT4-201ENST00000394440 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 P2RX5Q93086 422 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 RIT2Q99578 217 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
CCT4-201ENST00000394440 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 GAS7O60861 476 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 COASYQ13057 564 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 PGM5Q15124 567 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 ARSHQ5FYA8 562 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 GPBP1Q86WP2 473 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
CCT4-201ENST00000394440 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
CCT4-201ENST00000394440 TUFT1Q9NNX1 390 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
CCT4-201ENST00000394440 IPO5O00410 1097 aaKnown RBP16.67■□□□□ 0.26
CCT4-201ENST00000394440 IDEP14735 1019 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.261e-7■■■□□ 18.6
CCT4-201ENST00000394440 KRT31Q15323 416 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 TCP11X2Q5H9J9 407 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 CENPPQ6IPU0 288 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 GUF1Q8N442 669 aaKnown RBP16.67■□□□□ 0.26
CCT4-201ENST00000394440 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 THAP9Q9H5L6 903 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 KCNH7Q9NS40 1196 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 HOXC10Q9NYD6 342 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 WDR81Q562E7 1941 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 BICDL2A1A5D9 508 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 MUTP22033 750 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 CYP4A11Q02928 519 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 PPATQ06203 517 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 TKFCQ3LXA3 575 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 NSMFQ6X4W1 530 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 MAF1Q9H063 256 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 UNC45AQ9H3U1 944 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 JADE2Q9NQC1 790 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 RGL1Q9NZL6 768 aa16.67■□□□□ 0.26
CCT4-201ENST00000394440 KCNJ18B7U540 433 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 TEX33O43247 280 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 SLITRK3O94933 977 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 SSBP05455 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCT4-201ENST00000394440 KCNJ12Q14500 433 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 NOC3LQ8WTT2 800 aaKnown RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 TAF1DQ9H5J8 278 aaPredicted RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 BMP2KQ9NSY1 1161 aaPredicted RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 PCDHA2Q9Y5H9 948 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 EYA4O95677 639 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
CCT4-201ENST00000394440 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 RMDN3Q96TC7 470 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 PANK4Q9NVE7 773 aa16.66■□□□□ 0.26
CCT4-201ENST00000394440 A0A0G2JLL6 359 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms