RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 NKX1-1Q15270 411 aaPredicted RBP15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 METTL23Q86XA0 190 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
PPARGC1B-203ENST00000394320 USP17L10C9JJH3 530 aa15.71■□□□□ 0.1
PPARGC1B-203ENST00000394320 I3L4J1 428 aa15.71■□□□□ 0.1
PPARGC1B-203ENST00000394320 KCNQ2O43526 872 aa15.71■□□□□ 0.1
PPARGC1B-203ENST00000394320 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.1
PPARGC1B-203ENST00000394320 PASKQ96RG2 1323 aa15.71■□□□□ 0.1
PPARGC1B-203ENST00000394320 STXBP2Q15833 593 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 C2orf69Q8N8R5 385 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 CDC23Q9UJX2 597 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 CNTNAP4Q9C0A0 1308 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 WDR64B1ANS9 1081 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 SFNP31947 248 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 GABPB1Q06547 395 aaPredicted RBP15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 SCYL2Q6P3W7 929 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 CYB5R4Q7L1T6 521 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 NSUN6Q8TEA1 469 aaKnown RBP15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 AIFM3Q96NN9 605 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 VPS37BQ9H9H4 285 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 HOMER3Q9NSC5 361 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 IFNB1P01574 187 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 GEN1Q17RS7 908 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 KMT5BQ4FZB7 885 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 C11orf57Q6ZUT1 292 aaPredicted RBP15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 VPS52Q8N1B4 723 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 PFDN6O15212 129 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 BFSP1Q12934 665 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 PRPF38AQ8NAV1 312 aaKnown RBP15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 PANX2Q96RD6 677 aa15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 ZHX1Q9UKY1 873 aaPredicted RBP15.7■□□□□ 0.1
PPARGC1B-203ENST00000394320 DCCP43146 1447 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 SORBS3O60504 671 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 TBC1D8O95759 1140 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 MYO1EQ12965 1108 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 MTERF2Q49AM1 385 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 STRIP1Q5VSL9 837 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 VSTM4Q8IW00 320 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 BARHL2Q9NY43 387 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 KIDINS220Q9ULH0 1771 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 CIB2O75838 187 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 ADCY8P40145 1251 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 PSMC4P43686 418 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 PRELPP51888 382 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 PALM2Q8IXS6 379 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 PPANQ9NQ55 473 aaKnown RBP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 SEL1LQ9UBV2 794 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 RGS16O15492 202 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 LRRC41Q15345 812 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 FTOQ9C0B1 505 aaKnown RBP eCLIP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 ATP8B3O60423 1300 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 A6NJR5 290 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 ZBTB24O43167 697 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 ZSCAN20P17040 1043 aaPredicted RBP15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 ARHGAP24Q8N264 748 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 BHMT2Q9H2M3 363 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
PPARGC1B-203ENST00000394320 K7ERI5 159 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 BUB1O43683 1085 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 GABPAQ06546 454 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 GPIHBP1Q8IV16 184 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 GSDMBQ8TAX9 411 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 RMDN3Q96TC7 470 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 KRT12Q99456 494 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 NDST4Q9H3R1 872 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 RRAGDQ9NQL2 400 aaPredicted RBP15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 MEIS1O00470 390 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 SERPING1P05155 500 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 C12orf60Q5U649 245 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 DDIT3P35638 169 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 USP11P51784 963 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 MTMR1Q13613 665 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 NEDD9Q14511 834 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 PPFIBP2Q8ND30 876 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 WRNIP1Q96S55 665 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 HOXA13P31271 388 aaPredicted RBP15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 CTNNA1P35221 906 aaKnown RBP15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 NSUN4Q96CB9 384 aaKnown RBP15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 CALR3Q96L12 384 aaKnown RBP15.68■□□□□ 0.1
PPARGC1B-203ENST00000394320 SPATA31A5Q5VU36 1347 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 SPATA31A7Q8IWB4 1347 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 F5H6K3 240 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 ATF2P15336 505 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 KLRC3Q07444 240 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 RBL2Q08999 1139 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 BBS5Q8N3I7 341 aa15.67■□□□□ 0.1
PPARGC1B-203ENST00000394320 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms