RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IFIT1BQ5T764 474 aaKnown RBP17.86■□□□□ 0.45
CHMP3-202ENST00000393773 MRPL38Q96DV4 380 aaKnown RBP17.86■□□□□ 0.45
CHMP3-202ENST00000393773 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 C17orf102A2RUQ5 167 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 PALM3A6NDB9 673 aaPredicted RBP17.85■□□□□ 0.45
CHMP3-202ENST00000393773 SMIM10L2AP0DMW4 78 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 SMIM10L2BP0DMW5 78 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 EPC2Q52LR7 807 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 ZNF318Q5VUA4 2279 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 SAMD3Q8N6K7 520 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 ATP6V0A1Q93050 837 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 ZFP91Q96JP5 570 aaPredicted RBP17.85■□□□□ 0.45
CHMP3-202ENST00000393773 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
CHMP3-202ENST00000393773 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-202ENST00000393773 H3BRB1 525 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 TREHO43280 583 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 CAND2O75155 1236 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 TGFB3P10600 412 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 CCND2P30279 289 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 COL19A1Q14993 1142 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 TIGD5Q53EQ6 642 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 PTCRAQ6ISU1 281 aaPredicted RBP17.84■□□□□ 0.45
CHMP3-202ENST00000393773 B4GALNT3Q6L9W6 998 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 GJD3Q8N144 294 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 SAMD11Q96NU1 681 aa17.84■□□□□ 0.45
CHMP3-202ENST00000393773 TUT1Q9H6E5 874 aaKnown RBP17.84■□□□□ 0.45
CHMP3-202ENST00000393773 HIP1O00291 1037 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 CTSHP09668 335 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 NUCB1Q02818 461 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 GRM4Q14833 912 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 HOMER1Q86YM7 354 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 TOP1MTQ969P6 601 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 PIGSQ96S52 555 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 CTNNA3Q9UI47 895 aa17.83■□□□□ 0.44
CHMP3-202ENST00000393773 TTC3P53804 2025 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 GRXCR2A6NFK2 248 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 PRR33A8MZF0 331 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 H3BNC9 293 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 GCOM1H8Y6P7 765 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-202ENST00000393773 CYTH3O43739 400 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 POLR2MP0CAP2 368 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 MRPS9P82933 396 aaKnown RBP17.82■□□□□ 0.44
CHMP3-202ENST00000393773 PTPROQ16827 1216 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 FCHSD1Q86WN1 690 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 TRIM50Q86XT4 487 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 SEPT8Q92599 483 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
CHMP3-202ENST00000393773 YME1L1Q96TA2 773 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 RNPEPQ9H4A4 650 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 RIOX1Q9H6W3 641 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 MLXIPQ9HAP2 919 aa17.82■□□□□ 0.44
CHMP3-202ENST00000393773 ICAM3P32942 547 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 ADAM17P78536 824 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 TCEAL5Q5H9L2 206 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 METTL7BQ6UX53 244 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 BANK1Q8NDB2 785 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 GPR20Q99678 358 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 TELO2Q9Y4R8 837 aa17.81■□□□□ 0.44
CHMP3-202ENST00000393773 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 LINC00271P0C7V0 271 aa17.8■□□□□ 0.44
CHMP3-202ENST00000393773 SSTR3P32745 418 aaPredicted RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 GPM6BQ13491 265 aa17.8■□□□□ 0.44
CHMP3-202ENST00000393773 PUS10Q3MIT2 529 aaKnown RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 TMEM192Q8IY95 271 aa17.8■□□□□ 0.44
CHMP3-202ENST00000393773 PABPC5Q96DU9 382 aaKnown RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 RC3H2Q9HBD1 1191 aaKnown RBP17.8■□□□□ 0.44
CHMP3-202ENST00000393773 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
CHMP3-202ENST00000393773 UPP2O95045 317 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 IGHDP01880 384 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 AAMPQ13685 434 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 GNPTABQ3T906 1256 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 CYFIP1Q7L576 1253 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 LMBR1Q8WVP7 490 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 APBB2Q92870 758 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 USP26Q9BXU7 913 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 IFIH1Q9BYX4 1025 aaKnown RBP17.79■□□□□ 0.44
CHMP3-202ENST00000393773 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
CHMP3-202ENST00000393773 SETD4Q9NVD3 440 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 PLXNA4Q9HCM2 1894 aa17.79■□□□□ 0.44
CHMP3-202ENST00000393773 PNMA6FA0A0J9YX94 578 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 SPATA31C2B4DYI2 1134 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 FIBPO43427 364 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 STAM2O75886 525 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 ZP2Q05996 745 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 TROAPQ12815 778 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 TRAF1Q13077 416 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 NEDD9Q14511 834 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 FAM26DQ5JW98 314 aa17.78■□□□□ 0.44
CHMP3-202ENST00000393773 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-202ENST00000393773 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
CHMP3-202ENST00000393773 C5orf67F2Z3F1 127 aa17.77■□□□□ 0.44
CHMP3-202ENST00000393773 ALADP13716 330 aa17.77■□□□□ 0.44
CHMP3-202ENST00000393773 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.44
CHMP3-202ENST00000393773 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms