RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 DTLQ9NZJ0 730 aa8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 STAT5AP42229 794 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 HTRA3P83110 453 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 TUSC3Q13454 348 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 CR1LQ2VPA4 569 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 FNDC3BQ53EP0 1204 aaKnown RBP8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 TTLL11Q8NHH1 800 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 CLEC4DQ8WXI8 215 aa8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
SNORA40.4-201ENST00000390971 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 GPR19Q15760 415 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 CRY1Q16526 586 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 ARHGAP36Q6ZRI8 547 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 LCNL1Q6ZST4 164 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 BRAPQ7Z569 592 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 NOP9Q86U38 636 aaKnown RBP8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 NLGN4XQ8N0W4 816 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 LINC01356Q8N9X3 169 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 SCLYQ96I15 445 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 HSPBP1Q9NZL4 362 aa8.68□□□□□ -1.02
SNORA40.4-201ENST00000390971 ESYT3A0FGR9 886 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 RASGRP1O95267 797 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 LRG1P02750 347 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 PYGMP11217 842 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 EP400NLQ6ZTU2 488 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 SAPCD2Q86UD0 394 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 HOMER1Q86YM7 354 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 TTLL6Q8N841 843 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 KYQ8NBH2 561 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 ZBTB8AQ96BR9 441 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 C11orf84Q9BUA3 381 aaPredicted RBP8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 TRIM39Q9HCM9 518 aa8.67□□□□□ -1.02
SNORA40.4-201ENST00000390971 TCRBV16S1A1N1A0A5B0 115 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 CCDC66A2RUB6 948 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 PDE6AP16499 860 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 DNM2P50570 870 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 EPHA5P54756 1037 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 KCTD1Q719H9 257 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 OSTM1Q86WC4 334 aa8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 RBM12BQ8IXT5 1001 aaKnown RBP8.66□□□□□ -1.02
SNORA40.4-201ENST00000390971 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 FFAR3O14843 346 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 PPP1R12AO14974 1030 aaPredicted RBP8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 NPTXRO95502 500 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 ASMTLO95671 621 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 LACTBP83111 547 aaPredicted RBP8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 GRIN1Q05586 938 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 VMACQ2NL98 169 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 VWA3BQ502W6 1294 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 TTLL7Q6ZT98 887 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 SH3RF2Q8TEC5 729 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 APPBP2Q92624 585 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 CBLCQ9ULV8 474 aa8.65□□□□□ -1.02
SNORA40.4-201ENST00000390971 SH3D21A4FU49 640 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 RFPL3O75679 317 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 LTFP02788 710 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 CKMP06732 381 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 FAHP16930 419 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 ITGA1P56199 1179 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 TCEA2Q15560 299 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 PAN2Q504Q3 1202 aaKnown RBP8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 FGD2Q7Z6J4 655 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 SYT3Q9BQG1 590 aa8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 CELF4Q9BZC1 486 aaKnown RBP8.64□□□□□ -1.03
SNORA40.4-201ENST00000390971 B4E1Z4 1266 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 AMY2AP04746 511 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 KRT15P19012 456 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 AMY2BP19961 511 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 SMAD4Q13485 552 aaKnown RBP8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 C16orf86Q6ZW13 317 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 ZNF526Q8TF50 670 aaPredicted RBP8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 TMEM209Q96SK2 561 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 CD244Q9BZW8 370 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 SPATA6Q9NWH7 488 aaPredicted RBP8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 SRPK3Q9UPE1 567 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 TELO2Q9Y4R8 837 aa8.63□□□□□ -1.03
SNORA40.4-201ENST00000390971 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 KCNA6P17658 529 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 BMP7P18075 431 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 JAM2P57087 298 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 DLX2Q07687 328 aaPredicted RBP8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 BTBD8Q5XKL5 378 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 LIPIQ6XZB0 460 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 STK32CQ86UX6 486 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 PTRH1Q86Y79 214 aaKnown RBP8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 TP53I13Q8NBR0 393 aaPredicted RBP8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
SNORA40.4-201ENST00000390971 NTMQ9P121 344 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms