RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 MBTPS1Q14703 1052 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
TRAV4-201ENST00000390426 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 KRT40Q6A162 431 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 TMEM87BQ96K49 555 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 ASB2Q96Q27 587 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 LZTS2Q9BRK4 669 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
TRAV4-201ENST00000390426 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 TELO2Q9Y4R8 837 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 MTCH2Q9Y6C9 303 aa12.34□□□□□ -0.43
TRAV4-201ENST00000390426 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 LCHNA4D1U4 455 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 MEIS2O14770 477 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 TREHO43280 583 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 FIBPO43427 364 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
TRAV4-201ENST00000390426 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 IKBKEQ14164 716 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 NECTIN1Q15223 517 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
TRAV4-201ENST00000390426 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 SERINC5Q86VE9 423 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 TRIM50Q86XT4 487 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 GPR20Q99678 358 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
TRAV4-201ENST00000390426 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
TRAV4-201ENST00000390426 RSPH10B2B2RC85 870 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 LGR5O75473 907 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 RSPH10BP0C881 870 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 POU3F3P20264 500 aaPredicted RBP12.32□□□□□ -0.44
TRAV4-201ENST00000390426 LIFRP42702 1097 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 GRB10Q13322 594 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 UBE2SQ16763 222 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAV4-201ENST00000390426 NLRX1Q86UT6 975 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 DBF4BQ8NFT6 615 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 USP26Q9BXU7 913 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 PSTPIP2Q9H939 334 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 SETD4Q9NVD3 440 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 CHD9Q3L8U1 2897 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 UNC80Q8N2C7 3258 aa12.32□□□□□ -0.44
TRAV4-201ENST00000390426 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 EFCAB14O75071 495 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 GJB5O95377 273 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 CALM1P0DP23 149 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 CALM2P0DP24 149 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 CALM3P0DP25 149 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 HOXC8P31273 242 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 TFF2Q03403 129 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 TMTC3Q6ZXV5 915 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 IL27Q8NEV9 243 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 ADAMTS19Q8TE59 1207 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 RAD9AQ99638 391 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 CDH23Q9H251 3354 aa12.31□□□□□ -0.44
TRAV4-201ENST00000390426 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
TRAV4-201ENST00000390426 ATP9AO75110 1047 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 CTSHP09668 335 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 GDPD5Q8WTR4 605 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 PKD2L1Q9P0L9 805 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
TRAV4-201ENST00000390426 LINC01553A4QN01 128 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 LPXNO60711 386 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 AMHP03971 560 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 GNAT1P11488 350 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 KCNA2P16389 499 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 ITGB5P18084 799 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 PLEKHG4Q58EX7 1191 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 SGMS1Q86VZ5 419 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 SEPT8Q92599 483 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 NEK1Q96PY6 1258 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
TRAV4-201ENST00000390426 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
TRAV4-201ENST00000390426 ZNF215Q9UL58 517 aaPredicted RBP12.29□□□□□ -0.44
TRAV4-201ENST00000390426 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
TRAV4-201ENST00000390426 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms