RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 ALX1Q15699 326 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 AMOTL1Q8IY63 956 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 IFNL3Q8IZI9 196 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 RHOVQ96L33 236 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 SPON2Q9BUD6 331 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 SRRTQ9BXP5 876 aaKnown RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 EPB41L4AQ9HCS5 686 aaPredicted RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 DCP1AQ9NPI6 582 aaPredicted RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 GGA3Q9NZ52 723 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
TRBV28-201ENST00000390400 ZMYM6O95789 1325 aa8.54□□□□□ -1.04
TRBV28-201ENST00000390400 LAMB1P07942 1786 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 LAMA4Q16363 1823 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 FOXP2O15409 715 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 CCP110O43303 1012 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 ENTPD3O75355 529 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 PAGE1O75459 146 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 HOXD8P13378 290 aaPredicted RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 CYP2C19P33261 490 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 TUBB4BP68371 445 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 IRX3P78415 501 aaPredicted RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 TCP10Q12799 353 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 RASIP1Q5U651 963 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 ANGEL2Q5VTE6 544 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 FBXL19Q6PCT2 694 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 SARM1Q6SZW1 724 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 FAM83AQ86UY5 434 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 BHMTQ93088 406 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 TMX3Q96JJ7 454 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 TMEM74Q96NL1 305 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 OSBPL5Q9H0X9 879 aaPredicted RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 NMRK2Q9NPI5 230 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 DDX4Q9NQI0 724 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 PSD3Q9NYI0 1048 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 MARK1Q9P0L2 795 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 RBM8AQ9Y5S9 174 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 DDX60LQ5H9U9 1706 aaKnown RBP8.53□□□□□ -1.04
TRBV28-201ENST00000390400 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
TRBV28-201ENST00000390400 COL2A1P02458 1487 aaPredicted RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 FGAP02671 866 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 HLA-DOAP06340 250 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 ATP11AP98196 1134 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 MLLT1Q03111 559 aaPredicted RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 FAM160A1Q05DH4 1040 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 RASA3Q14644 834 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 IMMTQ16891 758 aaKnown RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 HFE2Q6ZVN8 426 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 RPAINQ86UA6 219 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 NCAPG2Q86XI2 1143 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 GOLGA6L1Q8N7Z2 621 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 PHC3Q8NDX5 983 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 FAM151AQ8WW52 585 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 NXPE3Q969Y0 559 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 ZNF837Q96EG3 531 aaPredicted RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 DEFB129Q9H1M3 183 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 DHX36Q9H2U1 1008 aaKnown RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 GINM1Q9NU53 330 aa8.52□□□□□ -1.05
TRBV28-201ENST00000390400 DDX19AQ9NUU7 478 aaKnown RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 ARGLU1Q9NWB6 273 aaPredicted RBP8.52□□□□□ -1.05
TRBV28-201ENST00000390400 CNTNAP1P78357 1384 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 ATRNL1Q5VV63 1379 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 ENC1O14682 589 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 ZNF213O14771 459 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 NRDCO43847 1150 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 PF4P02776 101 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 SLC3A2P08195 630 aaKnown RBP8.51□□□□□ -1.05
TRBV28-201ENST00000390400 CYP2D6P10635 497 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 ITPKAP23677 461 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 YY1P25490 414 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 U2AF2P26368 475 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRBV28-201ENST00000390400 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
TRBV28-201ENST00000390400 HSPA4P34932 840 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 SOX18P35713 384 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 EIF4A3P38919 411 aaKnown RBP8.51□□□□□ -1.05
TRBV28-201ENST00000390400 HAND2P61296 217 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 CTBSQ01459 385 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 CREB3L3Q68CJ9 461 aa8.51□□□□□ -1.05
TRBV28-201ENST00000390400 FIGNL1Q6PIW4 674 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms