RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 LCHNA4D1U4 455 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 NOP56O00567 594 aaKnown RBP16.31■□□□□ 0.2
SHOX-202ENST00000381575 TGFB3P10600 412 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 KCNJ6P48051 423 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 RBL2Q08999 1139 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 GNPTABQ3T906 1256 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 TRAF7Q6Q0C0 670 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
SHOX-202ENST00000381575 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 H3BRB1 525 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 SMIM10L2AP0DMW4 78 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 SMIM10L2BP0DMW5 78 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 THPOP40225 353 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 GNAQP50148 359 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 TAP1Q03518 808 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 UTP14CQ5TAP6 766 aaKnown RBP16.3■□□□□ 0.2
SHOX-202ENST00000381575 FAM117BQ6P1L5 589 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 CNKSR3Q6P9H4 555 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 TUT1Q9H6E5 874 aaKnown RBP16.3■□□□□ 0.2
SHOX-202ENST00000381575 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 SIP14410 1827 aa16.3■□□□□ 0.2
SHOX-202ENST00000381575 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 C17orf102A2RUQ5 167 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 TREHO43280 583 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 FIBPO43427 364 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 TLL1O43897 1013 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 BAIAP3O94812 1187 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 CXCL10P02778 98 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 CTSHP09668 335 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 ICAM3P32942 547 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 LIFRP42702 1097 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 PCNX4Q63HM2 1172 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 METTL7BQ6UX53 244 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 GPR20Q99678 358 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 MTA3Q9BTC8 594 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 OSBPL7Q9BZF2 842 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 THEGQ9P2T0 379 aa16.29■□□□□ 0.2
SHOX-202ENST00000381575 NEDD9Q14511 834 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
SHOX-202ENST00000381575 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 PSTPIP2Q9H939 334 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 SETD4Q9NVD3 440 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 MYO7AQ13402 2215 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
SHOX-202ENST00000381575 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 PIK3CDO00329 1044 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 ATP9AO75110 1047 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 STAM2O75886 525 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 CALM1P0DP23 149 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 CALM2P0DP24 149 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 CALM3P0DP25 149 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 SMARCA1P28370 1054 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 ADCK5Q3MIX3 580 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 APOA5Q6Q788 366 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 PGBD1Q96JS3 809 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.2
SHOX-202ENST00000381575 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 HOXC8P31273 242 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 SKIV2LQ15477 1246 aaKnown RBP16.26■□□□□ 0.19
SHOX-202ENST00000381575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
SHOX-202ENST00000381575 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 USP26Q9BXU7 913 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 MTCH2Q9Y6C9 303 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 NLRC5Q86WI3 1866 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 LGR5O75473 907 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 PARNO95453 639 aaKnown RBP16.26■□□□□ 0.19
SHOX-202ENST00000381575 CPA1P15085 419 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 KCNA2P16389 499 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 ITGB5P18084 799 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 MARK3P27448 753 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 ARHGAP4P98171 946 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 TFF2Q03403 129 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 DBF4BQ8NFT6 615 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 GDPD5Q8WTR4 605 aa16.26■□□□□ 0.19
SHOX-202ENST00000381575 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
SHOX-202ENST00000381575 ABHD14A-ACY1A0A1B0GW23 586 aa16.25■□□□□ 0.19
SHOX-202ENST00000381575 CDC45O75419 566 aa16.25■□□□□ 0.19
SHOX-202ENST00000381575 GJB5O95377 273 aa16.25■□□□□ 0.19
SHOX-202ENST00000381575 TCF7P36402 384 aaPredicted RBP16.25■□□□□ 0.19
SHOX-202ENST00000381575 EXOSC10Q01780 885 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms