RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 TMEM106CQ9BVX2 250 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 CRISPLD2Q9H0B8 497 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 AP5M1Q9H0R1 490 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 UPF3AQ9H1J1 476 aaKnown RBP17.52■□□□□ 0.4
PDGFB-202ENST00000381551 MLXIPQ9HAP2 919 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 XPNPEP3Q9NQH7 507 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.52■□□□□ 0.4
PDGFB-202ENST00000381551 TBC1D22BQ9NU19 505 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 NFASCO94856 1347 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 A6NJR5 290 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 CTAGE5O15320 804 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 NEMFO60524 1076 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 ADAMTS4O75173 837 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 FARP2O94887 1054 aaPredicted RBP17.51■□□□□ 0.39
PDGFB-202ENST00000381551 PGK1P00558 417 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 GJA8P48165 433 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
PDGFB-202ENST00000381551 NUCB2P80303 420 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 METTL7BQ6UX53 244 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 OR6J1Q8NGC5 347 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
PDGFB-202ENST00000381551 GJA10Q969M2 543 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 FAM20AQ96MK3 541 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 RIT2Q99578 217 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
PDGFB-202ENST00000381551 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 SORBS3O60504 671 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 PSMD10O75832 226 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 ARRDC4Q8NCT1 418 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 KLHDC9Q8NEP7 349 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 TELO2Q9Y4R8 837 aa17.5■□□□□ 0.39
PDGFB-202ENST00000381551 MYADML2A6NDP7 307 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 BAG4O95429 457 aaKnown RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 PTGDRQ13258 359 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 CALCRLQ16602 461 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 HSDL1Q3SXM5 330 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 GNASQ5JWF2 1037 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 CCSAPQ6IQ19 270 aaPredicted RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 AFG1LQ8WV93 481 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 JPH1Q9HDC5 661 aaPredicted RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
PDGFB-202ENST00000381551 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
PDGFB-202ENST00000381551 MARCH6O60337 910 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 CCNE2O96020 404 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 CAPN2P17655 700 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 CST5P28325 142 aaPredicted RBP17.48■□□□□ 0.39
PDGFB-202ENST00000381551 CPT1AP50416 773 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 BEX3Q00994 111 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 LRRC41Q15345 812 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
PDGFB-202ENST00000381551 FSCN1Q16658 493 aaKnown RBP17.48■□□□□ 0.39
PDGFB-202ENST00000381551 LRCH2Q5VUJ6 765 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 B3GNT9Q6UX72 402 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 RNF180Q86T96 592 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 PPTC7Q8NI37 304 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 GPR20Q99678 358 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
PDGFB-202ENST00000381551 BRCA2P51587 3418 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 GSTTP1A0A1W2PQM5 241 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 DDX39AO00148 427 aaKnown RBP17.47■□□□□ 0.39
PDGFB-202ENST00000381551 LAD1O00515 517 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 GAS7O60861 476 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 TXKP42681 527 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 SEPT1Q8WYJ6 367 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
PDGFB-202ENST00000381551 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 TEKT3Q9BXF9 490 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
PDGFB-202ENST00000381551 VAV3Q9UKW4 847 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
PDGFB-202ENST00000381551 KIAA0100Q14667 2235 aaKnown RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 NOP56O00567 594 aaKnown RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 ATG7O95352 703 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 MMP3P08254 477 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 OR52Z1P0C646 297 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 HOXD8P13378 290 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 ACTR2P61160 394 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 KRT76Q01546 638 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 SP4Q02446 784 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 PTPAQ15257 358 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 KCNA10Q16322 511 aa17.46■□□□□ 0.39
PDGFB-202ENST00000381551 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 ZNF746Q6NUN9 644 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 PCSK9Q8NBP7 692 aaKnown RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 TSEN34Q9BSV6 310 aaKnown RBP17.46■□□□□ 0.39
PDGFB-202ENST00000381551 FTOQ9C0B1 505 aaKnown RBP eCLIP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms