RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ANKRD40Q6AI12 368 aa20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 PYM1Q9BRP8 204 aaKnown RBP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 IQSEC3Q9UPP2 1182 aaPredicted RBP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 V9GY48 417 aaPredicted RBP20.75■□□□□ 0.91
SMARCD1-201ENST00000381513 PPFIA2O75334 1257 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 KLC1Q07866 573 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 LRRC14Q15048 493 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 MFSD6Q6ZSS7 791 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 TMC3Q7Z5M5 1100 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 ABCF2Q9UG63 623 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 KRIT1O00522 736 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 SLCO1A2P46721 670 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 SCNN1BP51168 640 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 KIAA0753Q2KHM9 967 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 DUSP9Q99956 384 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 DDX23Q9BUQ8 820 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 AKAP12Q02952 1782 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 A0A1W2PQJ5 194 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 SETSIPP0DME0 302 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 ZNF131P52739 623 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 ANKIB1Q9P2G1 1089 aa20.74■□□□□ 0.91
SMARCD1-201ENST00000381513 SLIT1O75093 1534 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 SOS2Q07890 1332 aaPredicted RBP20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 SUN1O94901 812 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 ITGA6P23229 1130 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 P2RX5Q93086 422 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 ERGIC2Q96RQ1 377 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 VCXQ9H320 206 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 AZI2Q9H6S1 392 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 PICK1Q9NRD5 415 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 FGFR1OP2Q9NVK5 253 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 WDR35Q9P2L0 1181 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 NKX1-2Q9UD57 310 aaPredicted RBP20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 PLEKHG1Q9ULL1 1385 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 PDE6CP51160 858 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 SYCP3Q8IZU3 236 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 CENPTQ96BT3 561 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 CELF4Q9BZC1 486 aaKnown RBP20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 ETNK1Q9HBU6 452 aa20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 USP15Q9Y4E8 981 aaPredicted RBP20.73■□□□□ 0.91
SMARCD1-201ENST00000381513 ATP2C1P98194 919 aaPredicted RBP20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 PDE4DQ08499 809 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 ZNF654Q8IZM8 581 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 FGD4Q96M96 766 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 BICDL2A1A5D9 508 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 TTI1O43156 1089 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 PJA2O43164 708 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 FLOT1O75955 427 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 SESN3P58005 492 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 IFI35P80217 286 aaPredicted RBP20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 TSNAXIP1Q2TAA8 658 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 MIIPQ5JXC2 388 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 KRT23Q9C075 422 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 SNX3O60493 162 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 NPTXRO95502 500 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 RNASELQ05823 741 aaKnown RBP20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 SOGA3Q5TF21 947 aa20.72■□□□□ 0.91
SMARCD1-201ENST00000381513 PP2D1A8MPX8 630 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 FOXO4P98177 505 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 MUM1Q2TAK8 710 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 TMEM165Q9HC07 324 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 MLXIPLQ9NP71 852 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 UTP11Q9Y3A2 253 aaKnown RBP20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 SLC9C1Q4G0N8 1177 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 FIGNQ5HY92 759 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 MEI1Q5TIA1 1274 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 ZFAND2BQ8WV99 257 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 ATXN2LQ8WWM7 1075 aaKnown RBP20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 FMO2Q99518 471 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 MOV10L1Q9BXT6 1211 aaKnown RBP20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 TRIM7Q9C029 511 aa20.71■□□□□ 0.91
SMARCD1-201ENST00000381513 CREB3O43889 395 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 CCNE1P24864 410 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 UBA7P41226 1012 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 GBP7Q8N8V2 638 aaPredicted RBP20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 TBC1D5Q92609 795 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 ZNF532Q9HCE3 1301 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 EIF3BP55884 814 aaKnown RBP20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 TLCD1Q96CP7 247 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 PCMTD2Q9NV79 361 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 C4BP0C0L5 1744 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 SP100P23497 879 aaPredicted RBP20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 DENND2CQ68D51 928 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 ZNF790Q6PG37 636 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 MAIP1Q8WWC4 291 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 SHISA4Q96DD7 197 aa20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 DHTKD1Q96HY7 919 aaPredicted RBP20.7■□□□□ 0.9
SMARCD1-201ENST00000381513 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 TCP11X1B4DZS4 312 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 ITGA4P13612 1032 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 HNRNPH3P31942 346 aaKnown RBP20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 ASIC1P78348 528 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 PBKQ96KB5 322 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 PACSIN1Q9BY11 444 aa20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 UBE2OQ9C0C9 1292 aaKnown RBP20.69■□□□□ 0.9
SMARCD1-201ENST00000381513 ARHGEF3Q9NR81 526 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms