RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SLCO1A2P46721 670 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 PALM2Q8IXS6 379 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 VPS52Q8N1B4 723 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 NFU1Q9UMS0 254 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 RRP15Q9Y3B9 282 aaKnown RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 MAP7D1Q3KQU3 841 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 CCDC13Q8IYE1 715 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 WDR11Q9BZH6 1224 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 UBE2TQ9NPD8 197 aaPredicted RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 A0A1B0GUA9 196 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 STAT2P52630 851 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 PDIA6Q15084 440 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 AOC3Q16853 763 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 SYDE2Q5VT97 1194 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 EXOC4Q96A65 974 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 GH2P01242 217 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 GAP43P17677 238 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 FMR1Q06787 632 aaKnown RBP eCLIP18.67■□□□□ 0.58
SGCB-201ENST00000381431 GSPT2Q8IYD1 628 aaKnown RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 KCNG1Q9UIX4 513 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 FBXO2Q9UK22 296 aaPredicted RBP18.67■□□□□ 0.58
SGCB-201ENST00000381431 SSX2IPQ9Y2D8 614 aa18.67■□□□□ 0.58
SGCB-201ENST00000381431 hCG_1984214I3L0E3 225 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 HNRNPH2P55795 449 aaKnown RBP18.66■□□□□ 0.58
SGCB-201ENST00000381431 PSMD2Q13200 908 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 ZNF713Q8N859 430 aaPredicted RBP18.66■□□□□ 0.58
SGCB-201ENST00000381431 CLTAP09496 248 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 KAZALD1Q96I82 304 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 MMS19Q96T76 1030 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 INTS9Q9NV88 658 aaKnown RBP18.66■□□□□ 0.58
SGCB-201ENST00000381431 KLHL14Q9P2G3 628 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 PASKQ96RG2 1323 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 LRRC53A6NM62 1247 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 TMEM191BP0C7N4 346 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 YARSP54577 528 aaKnown RBP18.66■□□□□ 0.58
SGCB-201ENST00000381431 NNTQ13423 1086 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 CYP4F22Q6NT55 531 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 CEP170P1Q96L14 293 aa18.66■□□□□ 0.58
SGCB-201ENST00000381431 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
SGCB-201ENST00000381431 GOLGA8IPA6NC78 632 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 GOLGA8JA6NMD2 632 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 POC1B-GALNT4F8VUJ3 575 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 ATF2P15336 505 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 CCZ1BP86790 482 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 CCZ1P86791 482 aaPredicted RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 GEN1Q17RS7 908 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 HPS3Q969F9 1004 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 MXI1P50539 228 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 CLNS1AP54105 237 aaKnown RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 MFAP3P55082 362 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 APBA1Q02410 837 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 ZKSCAN8Q15776 578 aaPredicted RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 HOOK2Q96ED9 719 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 SEPT9Q9UHD8 586 aaPredicted RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 PABPN1LA6NDY0 278 aaKnown RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 USP17L10C9JJH3 530 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 BFSP1Q12934 665 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 ZBTB8OSQ8IWT0 167 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 MTA3Q9BTC8 594 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 SH3GLB2Q9NR46 395 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 TDP2O95551 362 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 FCER1AP12319 257 aa18.65■□□□□ 0.58
SGCB-201ENST00000381431 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 SDCCAG8Q86SQ7 713 aaPredicted RBP18.65■□□□□ 0.58
SGCB-201ENST00000381431 POTEB3A0JP26 581 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 POTECB2RU33 542 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 LGSNQ5TDP6 509 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 POTEBQ6S5H4 581 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 FLAD1Q8NFF5 587 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.64■□□□□ 0.57
SGCB-201ENST00000381431 MAPK4P31152 587 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 ATP2C1P98194 919 aaPredicted RBP18.64■□□□□ 0.57
SGCB-201ENST00000381431 RILPQ96NA2 401 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 RNF14Q9UBS8 474 aa18.64■□□□□ 0.57
SGCB-201ENST00000381431 CTNND1O60716 968 aaKnown RBP18.63■□□□□ 0.57
SGCB-201ENST00000381431 MAN1A1P33908 653 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 IGBP1P78318 339 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 GFPT1Q06210 699 aaPredicted RBP18.63■□□□□ 0.57
SGCB-201ENST00000381431 CHP1Q99653 195 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 KMT5AQ9NQR1 393 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 ESYT3A0FGR9 886 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 PALMO75781 387 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 CIB2O75838 187 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 PIK3CAP42336 1068 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 RCAN1P53805 252 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 PCDHB4Q9Y5E5 795 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 MMP10P09238 476 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms