RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 NFRKBQ6P4R8 1299 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 CACNA2D4Q7Z3S7 1137 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 ANKRD13CQ8N6S4 541 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 ZC3H12CQ9C0D7 883 aaKnown RBP21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 KANSL2Q9H9L4 492 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 EHD2Q9NZN4 543 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 HPCAL4Q9UM19 191 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 PCDHAC2Q9Y5I4 1007 aa21.59■■□□□ 1.05
SHROOM1-202ENST00000378676 NCK2O43639 380 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 RAD21O60216 631 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 HLA-DOAP06340 250 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 PLA2G4BP0C869 781 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 SLC1A4P43007 532 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 MAGEA1P43355 309 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 RAD51AP2Q09MP3 1159 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 SEPT2Q15019 361 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 EZH2Q15910 746 aaKnown RBP21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 SMARCAL1Q9NZC9 954 aa21.58■■□□□ 1.05
SHROOM1-202ENST00000378676 SCN9AQ15858 1988 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 TLR2O60603 784 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 MCM3P25205 808 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 HOXA7P31268 230 aaPredicted RBP21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 CACNB3P54284 484 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 GPBP1Q86WP2 473 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 PSMB7Q99436 277 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 ANO3Q9BYT9 981 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 NT5C3AQ9H0P0 336 aa21.58■■□□□ 1.04
SHROOM1-202ENST00000378676 PJA2O43164 708 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 MAP9Q49MG5 647 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 OSBPL9Q96SU4 736 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 P2RX7Q99572 595 aaKnown RBP21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 HINFPQ9BQA5 517 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 LSM14BQ9BX40 385 aaKnown RBP21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 VIPAS39Q9H9C1 493 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 KCNMB3Q9NPA1 279 aa21.57■■□□□ 1.04
SHROOM1-202ENST00000378676 MED24O75448 989 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 SYF2O95926 243 aaKnown RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CXCR5P32302 372 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 AARSP49588 968 aaKnown RBP eCLIP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 IRX5P78411 483 aaPredicted RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 HSP90B2PQ58FF3 399 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 TEKT1Q969V4 418 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 ACBD3Q9H3P7 528 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CYP11B2P19099 503 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 RASSF7Q02833 373 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CDC37Q16543 378 aaPredicted RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 TDRD12Q587J7 1177 aaKnown RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CCNI2Q6ZMN8 369 aaPredicted RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 ZNF572Q7Z3I7 529 aaPredicted RBP21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 SCFD1Q8WVM8 642 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CRACR2AQ9BSW2 395 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 EDEM3Q9BZQ6 932 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 KCTD10Q9H3F6 313 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 MED4Q9NPJ6 270 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 CEP72Q9P209 647 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 PCDHA1Q9Y5I3 950 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 SMCHD1A6NHR9 2005 aa21.56■■□□□ 1.04
SHROOM1-202ENST00000378676 EEF2P13639 858 aaKnown RBP21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 ZSCAN26Q16670 478 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 MUM1L1Q5H9M0 696 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 HHIPL2Q6UWX4 724 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 CCDC65Q8IXS2 484 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 MMGT1Q8N4V1 131 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 HDAC7Q8WUI4 952 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 CEP63Q96MT8 703 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 SELENOOQ9BVL4 669 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 HYOU1Q9Y4L1 999 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 SSU72P8A0A1W2PR75 194 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 POTEIP0CG38 1075 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 POTEGQ6S5H5 508 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 POTEEQ6S8J3 1075 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 TRIM59Q8IWR1 403 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 ALS2CR12Q96Q35 445 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 EHD4Q9H223 541 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 KCNQ5Q9NR82 932 aa21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 BMP2KQ9NSY1 1161 aaPredicted RBP21.55■■□□□ 1.04
SHROOM1-202ENST00000378676 BUB1O43683 1085 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 CRKP46108 304 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 SNAP25P60880 206 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 TCP10Q12799 353 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 ARSHQ5FYA8 562 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 HERC4Q5GLZ8 1057 aaPredicted RBP21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 FAM83BQ5T0W9 1011 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 LRRC1Q9BTT6 524 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 RNF40O75150 1001 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 PRLRP16471 622 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 POLR2FP61218 127 aaKnown RBP21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 SPATA4Q8NEY3 305 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 IPO4Q8TEX9 1081 aaKnown RBP21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 RIN2Q8WYP3 895 aaPredicted RBP21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 MBOAT7Q96N66 472 aa21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 NAP1L4Q99733 375 aaKnown RBP21.54■■□□□ 1.04
SHROOM1-202ENST00000378676 DDTLA6NHG4 134 aaPredicted RBP21.53■■□□□ 1.04
SHROOM1-202ENST00000378676 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms