RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 NR1D1P20393 614 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF76P36508 570 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PAPD7Q5XG87 772 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PIGOQ8TEQ8 1089 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 KBTBD4Q9NVX7 518 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 USP17L10C9JJH3 530 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 NR2F2P24468 414 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 GJC1P36383 396 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 ADCY7P51828 1080 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 SETQ01105 290 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 GRB10Q13322 594 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 ASIC2Q16515 512 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 MAN2A1Q16706 1144 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 OTUD6AQ7L8S5 288 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 RPGRQ92834 1020 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 NUP58Q9BVL2 599 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 DDX25Q9UHL0 483 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 NOVA2Q9UNW9 492 aaKnown RBP12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
MCF2L-202ENST00000375597 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-202ENST00000375597 DAPK3O43293 454 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 TRAPPC10P48553 1259 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 CYP2J2P51589 502 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 ARL6IP4Q66PJ3 421 aaKnown RBP12.96□□□□□ -0.33
MCF2L-202ENST00000375597 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-202ENST00000375597 IFT20Q8IY31 132 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 KRIT1O00522 736 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 RASA1P20936 1047 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 KCNA1Q09470 495 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 ZFYVE27Q5T4F4 411 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 MMTAG2Q9BU76 263 aaKnown RBP12.96□□□□□ -0.33
MCF2L-202ENST00000375597 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
MCF2L-202ENST00000375597 PHF20L1A8MW92 1017 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 DCDC2CA8MYV0 355 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 GCNT3O95395 438 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 EPHB4P54760 987 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 COASYQ13057 564 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 CPLX4Q7Z7G2 160 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PKD1L3Q7Z443 1732 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 SORBS3O60504 671 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 AKR1B1P15121 316 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 RFC4P35249 363 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 FLT3P36888 993 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 GNAQP50148 359 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PPP2R5BQ15173 497 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 KLHDC7AQ5VTJ3 777 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PEX26Q7Z412 305 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
MCF2L-202ENST00000375597 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 TAF1P21675 1872 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 ZBTB39O15060 712 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 EIF3HO15372 352 aaKnown RBP eCLIP12.95□□□□□ -0.349e-7■■□□□ 12.8
MCF2L-202ENST00000375597 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 PSD3Q9NYI0 1048 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 GLI3P10071 1580 aa12.95□□□□□ -0.34
MCF2L-202ENST00000375597 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CDR1P51861 262 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CASP5P51878 434 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
MCF2L-202ENST00000375597 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 BLOC1S4Q9NUP1 217 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 A0A1W2PQC6 194 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PSMC6P62333 389 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PAK2Q13177 524 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 GRM4Q14833 912 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-202ENST00000375597 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 PNMA5Q96PV4 448 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
MCF2L-202ENST00000375597 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms