RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SPZ1Q9BXG8 430 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 WDR11Q9BZH6 1224 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RANBP17Q9H2T7 1088 aaKnown RBP12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FRMPD2Q68DX3 1309 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TRANK1O15050 2925 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PFKMP08237 780 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SCG2P13521 617 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CALML3P27482 149 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 OR6J1Q8NGC5 347 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RIOX1Q9H6W3 641 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 VAT1LQ9HCJ6 419 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
HLA-DQA1-202ENST00000374949 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CYTH3O43739 400 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ARHGEF15O94989 841 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CPT1AP50416 773 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GNL2Q13823 731 aaKnown RBP12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MTG1Q9BT17 334 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MMP1P03956 469 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BMP1P13497 986 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 DNM1Q05193 864 aaKnown RBP12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NBR1Q14596 966 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NBPF20Q3BBV1 942 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BRAPQ7Z569 592 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CLEC4DQ8WXI8 215 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ARNTL2Q8WYA1 636 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 COPS5Q92905 334 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SEC63Q9UGP8 760 aaKnown RBP12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 KCNJ14Q9UNX9 436 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 MTCH2Q9Y6C9 303 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 XIRP2A4UGR9 3374 aa12.48□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TRIP12Q14669 1992 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RBM47A0AV96 593 aaKnown RBP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GTPBP6O43824 516 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ACTN1P12814 892 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 U2AF2P26368 475 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 KRT85P78386 507 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PDE4DQ08499 809 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BTNL9Q6UXG8 535 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RNF207Q6ZRF8 634 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SPRED2Q7Z698 418 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ADGRF4Q8IZF3 695 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PIGSQ96S52 555 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SLC9A7Q96T83 725 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 JMJD4Q9H9V9 463 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 VPS54Q9P1Q0 977 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 RFC2P35250 354 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 PLA2G5P39877 138 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NLRP5P59047 1200 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TAP1Q03518 808 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms