RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NIPA1Q7RTP0 329 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 GPBP1Q86WP2 473 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CCDC65Q8IXS2 484 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 HPS3Q969F9 1004 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ZKSCAN4Q969J2 545 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 VPS16Q9H269 839 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PANK4Q9NVE7 773 aa20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.05■□□□□ 0.8
HLA-DQB1-201ENST00000374943 C19orf81C9J6K1 198 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 NFIBO00712 420 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ZBED4O75132 1171 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 BCRP11274 1271 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SUPT20HL1Q3ZLR7 823 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 LRCH2Q5VUJ6 765 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PPFIBP1Q86W92 1011 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SYT2Q8N9I0 419 aaPredicted RBP20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CCDC51Q96ER9 411 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 C16orf45Q96MC5 204 aaPredicted RBP20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 EIF2AK1Q9BQI3 630 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 DNM3Q9UQ16 869 aa20.04■□□□□ 0.8
HLA-DQB1-201ENST00000374943 A0A1W2PQC6 194 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 SSBP05455 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 TPM2P07951 284 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 GOLGA8FQ08AF8 430 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 GOLGA8DPQ0D2H9 430 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FAM26FQ5R3K3 315 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 BAG1Q99933 345 aaPredicted RBP20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MXRA8Q9BRK3 442 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 RAVER2Q9HCJ3 691 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 COL20A1Q9P218 1284 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MYH11P35749 1972 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 KIF2AO00139 706 aaPredicted RBP20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 EML1O00423 815 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MFAP3LO75121 409 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ALAS1P13196 640 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ARSHQ5FYA8 562 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 B3GNT9Q6UX72 402 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CNGA4Q8IV77 575 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ZNF507Q8TCN5 953 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 HSD17B14Q9BPX1 270 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 NAA15Q9BXJ9 866 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PCDHA2Q9Y5H9 948 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 WDR81Q562E7 1941 aa20.03■□□□□ 0.8
HLA-DQB1-201ENST00000374943 VWA5AO00534 786 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 EYA4O95677 639 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FGFR1OPO95684 399 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 GYPCP04921 128 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 TNNT1P13805 278 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 FECHP22830 423 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 OAZ1P54368 228 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ADKP55263 362 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 UBXN2AP68543 259 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 RBL2Q08999 1139 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PRAMEF18Q5VWM3 479 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 MYOCDQ8IZQ8 938 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CPXCR1Q8N123 301 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 PPP1R13BQ96KQ4 1090 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 CNOT6LQ96LI5 555 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 RIT2Q99578 217 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 ADAMTS5Q9UNA0 930 aa20.02■□□□□ 0.8
HLA-DQB1-201ENST00000374943 A0A0G2JMZ2 1700 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GAS7O60861 476 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TPM1P09493 284 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 DNM2P50570 870 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PSMC6P62333 389 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PTPN14Q15678 1187 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MUM1L1Q5H9M0 696 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PCNX4Q63HM2 1172 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MB21D1Q8N884 522 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 REPS2Q8NFH8 660 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SYTL5Q8TDW5 730 aaPredicted RBP20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TUBGCP2Q9BSJ2 902 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZNF577Q9BSK1 485 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ADARB2Q9NS39 739 aaKnown RBP20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 KIAA1217Q5T5P2 1943 aa20.01■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ARP10275 920 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 UBXN1Q04323 297 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZCWPW2Q504Y3 356 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ATG4CQ96DT6 458 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TSG101Q99816 390 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TEKT3Q9BXF9 490 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZHX2Q9Y6X8 837 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 KIF20AO95235 890 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TUBB4AP04350 444 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ITGB5P18084 799 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 DSG3P32926 999 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GIT2Q14161 759 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CEP135Q66GS9 1140 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MYRIPQ8NFW9 859 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 NEK9Q8TD19 979 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TRMT1Q9NXH9 659 aaKnown RBP20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 UBIAD1Q9Y5Z9 338 aa20■□□□□ 0.79
HLA-DQB1-201ENST00000374943 LCTP09848 1927 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MYPNQ86TC9 1320 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms