RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.32
HSPG2-201ENST00000374673 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 PPTC7Q8NI37 304 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 ZNF577Q9BSK1 485 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.32
HSPG2-201ENST00000374673 BCAS3Q9H6U6 928 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 PKD2L1Q9P0L9 805 aa17.02■□□□□ 0.32
HSPG2-201ENST00000374673 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 TBX3O15119 743 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 MMP3P08254 477 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 EN2P19622 333 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-201ENST00000374673 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-201ENST00000374673 SOX10P56693 466 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 RESTQ13127 1097 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 BRDTQ58F21 947 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-201ENST00000374673 TTC38Q5R3I4 469 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
HSPG2-201ENST00000374673 ETNPPLQ8TBG4 499 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 SLC5A5Q92911 643 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 SPATA33Q96N06 139 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-201ENST00000374673 KCNMB3Q9NPA1 279 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 TBC1D22BQ9NU19 505 aa17.01■□□□□ 0.31
HSPG2-201ENST00000374673 MOXD2PA6NHM9 499 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 DHX15O43143 795 aaKnown RBP17■□□□□ 0.31
HSPG2-201ENST00000374673 ZEB2O60315 1214 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 HOXD8P13378 290 aaPredicted RBP17■□□□□ 0.31
HSPG2-201ENST00000374673 ATP2B1P20020 1258 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 BEX3Q00994 111 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 HSDL1Q3SXM5 330 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 GNASQ5JWF2 1037 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 POTEDQ86YR6 584 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 AFG1LQ8WV93 481 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 FAM20AQ96MK3 541 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 RIT2Q99578 217 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 JPH1Q9HDC5 661 aaPredicted RBP17■□□□□ 0.31
HSPG2-201ENST00000374673 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 PHF24Q9UPV7 400 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
HSPG2-201ENST00000374673 WDR81Q562E7 1941 aa17■□□□□ 0.31
HSPG2-201ENST00000374673 SORBS3O60504 671 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 NEMFO60524 1076 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-201ENST00000374673 MCM7P33993 719 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 KCNA10Q16322 511 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 HAS1Q92839 578 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 GPR20Q99678 358 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
HSPG2-201ENST00000374673 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
HSPG2-201ENST00000374673 NOP56O00567 594 aaKnown RBP16.98■□□□□ 0.31
HSPG2-201ENST00000374673 KPNA6O60684 536 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 PSMD10O75832 226 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 ASGR1P07306 291 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-201ENST00000374673 COL6A1P12109 1028 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 PKP1Q13835 747 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 NBR1Q14596 966 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 ZNF174Q15697 407 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 DGKDQ16760 1214 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 SLFN12Q8IYM2 578 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 PCDHB6Q9Y5E3 794 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
HSPG2-201ENST00000374673 ELP1O95163 1332 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 BRCA2P51587 3418 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 DDX39AO00148 427 aaKnown RBP16.97■□□□□ 0.31
HSPG2-201ENST00000374673 GAS7O60861 476 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 PPFIA4O75335 1185 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 ATG7O95352 703 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
HSPG2-201ENST00000374673 F13A1P00488 732 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 ACLYP53396 1101 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 PURAQ00577 322 aaKnown RBP16.97■□□□□ 0.31
HSPG2-201ENST00000374673 KRT76Q01546 638 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 CALCRLQ16602 461 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 ZNF746Q6NUN9 644 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-201ENST00000374673 B3GNT9Q6UX72 402 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
HSPG2-201ENST00000374673 SEPT1Q8WYJ6 367 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 GJA10Q969M2 543 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 MTMR9Q96QG7 549 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 UIMC1Q96RL1 719 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 TELO2Q9Y4R8 837 aa16.97■□□□□ 0.31
HSPG2-201ENST00000374673 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-201ENST00000374673 GSTTP1A0A1W2PQM5 241 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 CABYRO75952 493 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 BRD1O95696 1058 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 CCNE2O96020 404 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 MYL3P08590 195 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 DDIT3P35638 169 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 ACTR2P61160 394 aa16.96■□□□□ 0.31
HSPG2-201ENST00000374673 SP4Q02446 784 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms