RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RAD54LQ92698 747 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 VTI1AQ96AJ9 217 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 MINPP1Q9UNW1 487 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 TNS3Q68CZ2 1445 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 POTEMA6NI47 508 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 ORC4O43929 436 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 CSF1RP07333 972 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 SRBD1Q8N5C6 995 aaKnown RBP18.96■□□□□ 0.63
PTPRU-202ENST00000373779 RNF10Q8N5U6 811 aaKnown RBP18.96■□□□□ 0.63
PTPRU-202ENST00000373779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTPRU-202ENST00000373779 BARHL2Q9NY43 387 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 SERPINB13Q9UIV8 391 aa18.96■□□□□ 0.63
PTPRU-202ENST00000373779 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 NCK2O43639 380 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 SUN1O94901 812 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 FMO2Q99518 471 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 C1orf112Q9NSG2 853 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC188H7C350 402 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC89Q8N998 374 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 RAB20Q9NX57 234 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 EIF3BP55884 814 aaKnown RBP18.95■□□□□ 0.62
PTPRU-202ENST00000373779 CFAP157Q5JU67 520 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 ARHGAP24Q8N264 748 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 BBOF1Q8ND07 529 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 MMS19Q96T76 1030 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 AGLP35573 1532 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 LRRN2O75325 713 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 TROVE2P10155 538 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTPRU-202ENST00000373779 PTPAQ15257 358 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 NSMFQ6X4W1 530 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC127Q96BQ5 260 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 EPB41L4AQ9HCS5 686 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-202ENST00000373779 H2AFXP16104 143 aaPredicted RBP18.95■□□□□ 0.62
PTPRU-202ENST00000373779 HSPA6P17066 643 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 DOK7Q18PE1 504 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 NEK9Q8TD19 979 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 VIPAS39Q9H9C1 493 aa18.95■□□□□ 0.62
PTPRU-202ENST00000373779 CLEC4GQ6UXB4 293 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 VPS52Q8N1B4 723 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 CPVLQ9H3G5 476 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 DR1Q01658 176 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 OTUD6AQ7L8S5 288 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 KRT26Q7Z3Y9 468 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC160A6NGH7 325 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 GYPCP04921 128 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 MFAP3P55082 362 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 ORC2Q13416 577 aaPredicted RBP18.94■□□□□ 0.62
PTPRU-202ENST00000373779 ADSSL1Q8N142 457 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 VIRMAQ69YN4 1812 aaKnown RBP18.94■□□□□ 0.62
PTPRU-202ENST00000373779 IRX5P78411 483 aaPredicted RBP18.94■□□□□ 0.62
PTPRU-202ENST00000373779 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 TBC1D31Q96DN5 1066 aa18.94■□□□□ 0.62
PTPRU-202ENST00000373779 MMS22LQ6ZRQ5 1243 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 HIP1RO75146 1068 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 MAN1A1P33908 653 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 ANKRD20A3Q5VUR7 823 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 KIAA0825Q8IV33 1275 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 ZBED4O75132 1171 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 PRPF6O94906 941 aaKnown RBP18.93■□□□□ 0.62
PTPRU-202ENST00000373779 IFNB1P01574 187 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 GRIN1Q05586 938 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 I3L4J1 428 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 COASYQ13057 564 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 ANKRD40Q6AI12 368 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 HPSEQ9Y251 543 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 SLIT1O75093 1534 aa18.93■□□□□ 0.62
PTPRU-202ENST00000373779 FCER1AP12319 257 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 PPP1R21Q6ZMI0 780 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 GUF1Q8N442 669 aaKnown RBP18.92■□□□□ 0.62
PTPRU-202ENST00000373779 GRID2IPA4D2P6 1211 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 BRINP3Q76B58 766 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 NLRX1Q86UT6 975 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 ZNF653Q96CK0 615 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 PCDHA6Q9UN73 950 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 PCDHA8Q9Y5H6 950 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 USP17L5A8MUK1 530 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 ECEL1O95672 775 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 SPATA4Q8NEY3 305 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 MAP3K14Q99558 947 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 DLATP10515 647 aaKnown RBP18.92■□□□□ 0.62
PTPRU-202ENST00000373779 CD19P15391 556 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 LGSNQ5TDP6 509 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 SRLQ86TD4 932 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 RUBCNQ92622 972 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 SNX12Q9UMY4 172 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 SRGNP10124 158 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 PHBP35232 272 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC14Q49A88 953 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 SPZ1Q9BXG8 430 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
PTPRU-202ENST00000373779 FGGP02679 453 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 SLMAPQ14BN4 828 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 ANO3Q9BYT9 981 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 TRIM10Q9UDY6 481 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms