RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 NHLH1Q02575 133 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 ITIH3Q06033 890 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 WTAPQ15007 396 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 POSTNQ15063 836 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 SH3D19Q5HYK7 790 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 IQCEQ6IPM2 695 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 PI16Q6UXB8 463 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 GBP6Q6ZN66 633 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 ARRDC4Q8NCT1 418 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 NEK11Q8NG66 645 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 GSDMAQ96QA5 445 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 WDR24Q96S15 920 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 NAPGQ99747 312 aaPredicted RBP14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 IDI2Q9BXS1 227 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 INTS13Q9NVM9 706 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 TACC3Q9Y6A5 838 aa14.37□□□□□ -0.11
CHCHD1-202ENST00000372837 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 KBTBD13C9JR72 458 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 KIAA0355O15063 1070 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 FANCGO15287 622 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 MBD4O95243 580 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 CLTBP09497 229 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 CALM1P0DP23 149 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 CALM2P0DP24 149 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 CALM3P0DP25 149 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 RAG1P15918 1043 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 TDO2P48775 406 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 ERVK-24P63145 666 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 CKAP4Q07065 602 aaKnown RBP14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 NTRK3Q16288 839 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 RTN1Q16799 776 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 NOSTRINQ8IVI9 506 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 MAGEB6Q8N7X4 407 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 ANKRD20A12PQ8NF67 263 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 DHX58Q96C10 678 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.36□□□□□ -0.117e-6■■■■□ 21.1
CHCHD1-202ENST00000372837 ANKZF1Q9H8Y5 726 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 ANAPC4Q9UJX5 808 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 NFE2L3Q9Y4A8 694 aa14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 SRPRBQ9Y5M8 271 aaKnown RBP14.36□□□□□ -0.11
CHCHD1-202ENST00000372837 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 SRRM3A6NNA2 597 aaPredicted RBP14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 SEC31AO94979 1220 aaKnown RBP14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 MMP1P03956 469 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 CYBAP13498 195 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 PRDX5P30044 214 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 RASGRF1Q13972 1273 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 TTC31Q49AM3 519 aaPredicted RBP14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 DNAJC21Q5F1R6 531 aaKnown RBP14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 CCDC148Q8NFR7 591 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 CEP89Q96ST8 783 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 RSPH14Q9UHP6 348 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
CHCHD1-202ENST00000372837 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 PI4K2BG5E9Z4 385 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 BIN1O00499 593 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 TLL1O43897 1013 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 IGHA2P01877 340 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 GUCY2CP25092 1073 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 CDC27P30260 824 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 CASP8Q14790 479 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 RASIP1Q5U651 963 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 CDKAL1Q5VV42 579 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 MICALL1Q8N3F8 863 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 WDR66Q8TBY9 1149 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 ESR2Q92731 530 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 PAGR1Q9BTK6 254 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 RNF26Q9BY78 433 aaPredicted RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 HAUS4Q9H6D7 363 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 DDX4Q9NQI0 724 aaKnown RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 ZSWIM5Q9P217 1185 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 SLC4A4Q9Y6R1 1079 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 MROH7-TTC4A0A0A0MT08 1334 aa14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
CHCHD1-202ENST00000372837 SHOX2O60902 331 aaPredicted RBP14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 MFAP3LO75121 409 aa14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 RRP1BQ14684 758 aaKnown RBP14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 LONRF3Q496Y0 759 aa14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 NPLOC4Q8TAT6 608 aa14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 EPB41L4AQ9HCS5 686 aaPredicted RBP14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 AATFQ9NY61 560 aaKnown RBP eCLIP14.33□□□□□ -0.12
CHCHD1-202ENST00000372837 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms