RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 UBR3Q6ZT12 1888 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 MYO3BQ8WXR4 1341 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 KDM3AQ9Y4C1 1321 aa14.08□□□□□ -0.16
CTPS1-202ENST00000372621 SFMBT2Q5VUG0 894 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 CAVIN3Q969G5 261 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 NLRC4Q9NPP4 1024 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 RBM12Q9NTZ6 932 aaKnown RBP14.07□□□□□ -0.16
CTPS1-202ENST00000372621 ZBTB5O15062 677 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 BUB1O43683 1085 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 GNA14O95837 355 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 EPHB4P54760 987 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 PICALMQ13492 652 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
CTPS1-202ENST00000372621 EMBQ6PCB8 327 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
CTPS1-202ENST00000372621 RNF14Q9UBS8 474 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 ATP6V0A2Q9Y487 856 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 FRMD3A2A2Y4 597 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 BBOX1O75936 387 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 MRPL12P52815 198 aaKnown RBP14.07□□□□□ -0.16
CTPS1-202ENST00000372621 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
CTPS1-202ENST00000372621 NAB2Q15742 525 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 CCDC40Q4G0X9 1142 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 SCFD1Q8WVM8 642 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 SWAP70Q9UH65 585 aa14.07□□□□□ -0.16
CTPS1-202ENST00000372621 E9PMD0 336 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 SHMT1P34896 483 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 FAM76AQ8TAV0 307 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 LSM14BQ9BX40 385 aaKnown RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 GOLGA6CA6NDK9 693 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 SLC26A4O43511 780 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 GOLGA6DP0CG33 693 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 PAFAH1B1P43034 410 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 SLC18A3Q16572 532 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 GPATCH4Q5T3I0 446 aaKnown RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 TSEN2Q8NCE0 465 aaKnown RBP14.06□□□□□ -0.16
CTPS1-202ENST00000372621 MS4A14Q96JA4 679 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 RASSF4Q9H2L5 321 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 PSTPIP2Q9H939 334 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 GOLGA6AQ9NYA3 693 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 PCDHGC5Q9Y5F6 944 aa14.06□□□□□ -0.16
CTPS1-202ENST00000372621 PLA2G4BP0C869 781 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 POLR2FP61218 127 aaKnown RBP14.05□□□□□ -0.16
CTPS1-202ENST00000372621 APBA1Q02410 837 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 CFAP221Q4G0U5 840 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 DPY19L2P1Q6NXN4 242 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 GANQ9H2C0 597 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 KIAA1024Q9UPX6 916 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 ADAMTSL1Q8N6G6 1762 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 NPHP3-ACAD11A0A0J9YXS1 232 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 CYP11B2P19099 503 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 SLC16A2P36021 539 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 GTF2IP78347 998 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 CCDC65Q8IXS2 484 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 MBOAT7Q96N66 472 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
CTPS1-202ENST00000372621 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
CTPS1-202ENST00000372621 SUGT1Q9Y2Z0 365 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 CYP3A7-CYP3A51PA0A087WV96 503 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 PALMO75781 387 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 ADRA2BP18089 450 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 CYP3A7P24462 503 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 KLRC1P26715 233 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 NNTQ13423 1086 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 ARSHQ5FYA8 562 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 MEI1Q5TIA1 1274 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 C10orf67Q8IYJ2 551 aa14.05□□□□□ -0.16
CTPS1-202ENST00000372621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
CTPS1-202ENST00000372621 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 POTECB2RU33 542 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 GOLGA8KD6RF30 607 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 GYS1P13807 737 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 CERS5Q8N5B7 392 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 TBC1D5Q92609 795 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 C8orf37Q96NL8 207 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 LRRC4BQ9NT99 713 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 A0A087X0T9 212 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 SERPINB2P05120 415 aa14.04□□□□□ -0.16
CTPS1-202ENST00000372621 FAM228BP0C875 321 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms