RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CARD9Q9H257 536 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CNNM2Q9H8M5 875 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 MED14O60244 1454 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 M0R2C6 588 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 MAPK13O15264 365 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CDR2Q01850 454 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ZNF658Q5TYW1 1059 aaPredicted RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 HAUS3Q68CZ6 603 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CNNM4Q6P4Q7 775 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 CROCCP2Q86T23 111 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
PTPN1-201ENST00000371621 RNF14Q9UBS8 474 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 HAO1Q9UJM8 370 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 TRIM33Q9UPN9 1127 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 RABGAP1Q9Y3P9 1069 aa12.78□□□□□ -0.36
PTPN1-201ENST00000371621 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 H2AFZP0C0S5 128 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 CEBPAP49715 358 aaPredicted RBP12.77□□□□□ -0.36
PTPN1-201ENST00000371621 EIF3BP55884 814 aaKnown RBP12.77□□□□□ -0.36
PTPN1-201ENST00000371621 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 C6orf118Q5T5N4 469 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 H2AFVQ71UI9 128 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 MMGT1Q8N4V1 131 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 CXorf38Q8TB03 319 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 AENQ8WTP8 325 aaKnown RBP12.77□□□□□ -0.36
PTPN1-201ENST00000371621 DTNBP1Q96EV8 351 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 PLVAPQ9BX97 442 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.36
PTPN1-201ENST00000371621 TET3O43151 1660 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 GAS8O95995 478 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 COPB2P35606 906 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 SKOR1P84550 965 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 TSGA10IPQ3SY00 556 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 TMEM139Q8IV31 216 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 FAM161BQ96MY7 647 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 CASQ2O14958 399 aaPredicted RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 CA4P22748 312 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 ADCY8P40145 1251 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 DR1Q01658 176 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 TRADDQ15628 312 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 CDC37Q16543 378 aaPredicted RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 HSP90AA5PQ58FG0 334 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 MIS18BP1Q6P0N0 1132 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 ARHGEF18Q6ZSZ5 1173 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 GORASP1Q9BQQ3 440 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 TMOD2Q9NZR1 351 aa12.77□□□□□ -0.37
PTPN1-201ENST00000371621 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
PTPN1-201ENST00000371621 NOL3O60936 208 aaKnown RBP12.76□□□□□ -0.37
PTPN1-201ENST00000371621 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
PTPN1-201ENST00000371621 HP1BP3Q5SSJ5 553 aaPredicted RBP12.76□□□□□ -0.37
PTPN1-201ENST00000371621 MADDQ8WXG6 1647 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 SIKE1Q9BRV8 207 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 FAM205CA6NFA0 338 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 RASSF9O75901 435 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 MMP1P03956 469 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 TBX2Q13207 712 aaPredicted RBP12.76□□□□□ -0.37
PTPN1-201ENST00000371621 GCKRQ14397 625 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 NDST4Q9H3R1 872 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 PMS2P54278 862 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 YTHDF3Q7Z739 585 aaKnown RBP12.76□□□□□ -0.37
PTPN1-201ENST00000371621 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 XAGE2Q96GT9 111 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
PTPN1-201ENST00000371621 ARAP3Q8WWN8 1544 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 ATP6V1B1P15313 513 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 KIF22Q14807 665 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 Q4G0T1 1027 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
PTPN1-201ENST00000371621 PAPD7Q5XG87 772 aaKnown RBP12.75□□□□□ -0.37
PTPN1-201ENST00000371621 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 EPAS1Q99814 870 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 KDM4CQ9H3R0 1056 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 SMYD3Q9H7B4 428 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 TCEAL9Q9UHQ7 104 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 SPAG7O75391 227 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 IFNB1P01574 187 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 BMP6P22004 513 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 GUCY1A2P33402 732 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 HERVK_113P62684 666 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 ICA1Q05084 483 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 PLS1Q14651 629 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 RCN1Q15293 331 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 NANOGNBQ7Z5D8 188 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 NME8Q8N427 588 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 P2RX5Q93086 422 aa12.75□□□□□ -0.37
PTPN1-201ENST00000371621 SH3GL2Q99962 352 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms