RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 CTAGE3PQ8IX95 158 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 EPSTI1Q96J88 318 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 MTA3Q9BTC8 594 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 TBC1D8O95759 1140 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 VIMP08670 466 aaKnown RBP16.05■□□□□ 0.16
NDC1-201ENST00000371429 MXI1P50539 228 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 PEX3P56589 373 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 SCARF1Q14162 830 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 NEDD9Q14511 834 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 TTLL4Q14679 1199 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 NEDD1Q8NHV4 660 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 ACAD9Q9H845 621 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 PFDN4Q9NQP4 134 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 CEP152O94986 1710 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 MED14O60244 1454 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
NDC1-201ENST00000371429 KRT15P19012 456 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 PSMD2Q13200 908 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 ALCAMQ13740 583 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 SURF1Q15526 300 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 RABL6Q3YEC7 729 aaPredicted RBP16.05■□□□□ 0.16
NDC1-201ENST00000371429 HAUS4Q9H6D7 363 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 AKR1B1P15121 316 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 ANKRD13CQ8N6S4 541 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 CCDC110Q8TBZ0 833 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
NDC1-201ENST00000371429 ZBTB12Q9Y330 459 aaPredicted RBP16.05■□□□□ 0.16
NDC1-201ENST00000371429 LRRN2O75325 713 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 LMNB1P20700 586 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 QRICH1Q2TAL8 776 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 SEPT10Q9P0V9 454 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 AFG3L2Q9Y4W6 797 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 KRIT1O00522 736 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 VPS41P49754 854 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 KRT76Q01546 638 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 SLFN12LQ6IEE8 588 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 CCDC121Q6ZUS5 278 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 MICAL1Q8TDZ2 1067 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 NSUN4Q96CB9 384 aaKnown RBP16.04■□□□□ 0.16
NDC1-201ENST00000371429 MMP19Q99542 508 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 ELP3Q9H9T3 547 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 LRRC4Q9HBW1 653 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 HYOU1Q9Y4L1 999 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 EPN1Q9Y6I3 576 aaPredicted RBP16.04■□□□□ 0.16
NDC1-201ENST00000371429 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 GMNNO75496 209 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 ELF1P32519 619 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 MAN1A1P33908 653 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 ARHGAP4P98171 946 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 RUFY4Q6ZNE9 571 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 ATG9AQ7Z3C6 839 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 HACL1Q9UJ83 578 aa16.04■□□□□ 0.16
NDC1-201ENST00000371429 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 CCNE1P24864 410 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 GRM4Q14833 912 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 PPP2R5EQ16537 467 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 AFAP1L2Q8N4X5 818 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 PLEKHA4Q9H4M7 779 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 EBAG9O00559 213 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 COPB2P35606 906 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 PPP1R18Q6NYC8 613 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 TNPO2O14787 897 aaKnown RBP16.03■□□□□ 0.16
NDC1-201ENST00000371429 ADCY8P40145 1251 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 BFSP1Q12934 665 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 DSTYKQ6XUX3 929 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 PALM2Q8IXS6 379 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 RPAP3Q9H6T3 665 aaPredicted RBP16.03■□□□□ 0.16
NDC1-201ENST00000371429 IFT122Q9HBG6 1241 aa16.03■□□□□ 0.16
NDC1-201ENST00000371429 ZNF233A6NK53 670 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA8SH3BPF8 625 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 CASP14P31944 242 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 PRELPP51888 382 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 RESTQ13127 1097 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.16
NDC1-201ENST00000371429 GIMAP7Q8NHV1 300 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 RPGRIP1Q96KN7 1286 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 ATP6V0A4Q9HBG4 840 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
NDC1-201ENST00000371429 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 CROCC2H7BZ55 1655 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 CAMSAP1Q5T5Y3 1602 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms