RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 HOXC8P31273 242 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 GRB10Q13322 594 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
RPF1-201ENST00000370654 FAM117BQ6P1L5 589 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 SERINC5Q86VE9 423 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 GPR20Q99678 358 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
RPF1-201ENST00000370654 TUT1Q9H6E5 874 aaKnown RBP15.2■□□□□ 0.02
RPF1-201ENST00000370654 XIRP2A4UGR9 3374 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 POU3F3P20264 500 aaPredicted RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 THPOP40225 353 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 KCNJ6P48051 423 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 KCNQ1P51787 676 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 MRPS5P82675 430 aaKnown RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 SP4Q02446 784 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 NECTIN1Q15223 517 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 DBF4BQ8NFT6 615 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 ADAMTS19Q8TE59 1207 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 SETD4Q9NVD3 440 aa15.19■□□□□ 0.02
RPF1-201ENST00000370654 TCF20Q9UGU0 1960 aaKnown RBP15.19■□□□□ 0.02
RPF1-201ENST00000370654 C17orf102A2RUQ5 167 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 TNFRSF10AO00220 468 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 ATP9AO75110 1047 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 BMP1P13497 986 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 UBE2SQ16763 222 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
RPF1-201ENST00000370654 METTL7BQ6UX53 244 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 NFXL1Q6ZNB6 911 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 GDPD5Q8WTR4 605 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 ATP6V0A1Q93050 837 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 MTUS1Q9ULD2 1270 aa15.18■□□□□ 0.02
RPF1-201ENST00000370654 ABHD14A-ACY1A0A1B0GW23 586 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 FIBPO43427 364 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 LGR5O75473 907 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 GJB5O95377 273 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 CTSHP09668 335 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 ITGB5P18084 799 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 MCM5P33992 734 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 TRAF1Q13077 416 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 TRANK1O15050 2925 aa15.17■□□□□ 0.02
RPF1-201ENST00000370654 LINC01553A4QN01 128 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 NOP56O00567 594 aaKnown RBP15.16■□□□□ 0.02
RPF1-201ENST00000370654 PARNO95453 639 aaKnown RBP15.16■□□□□ 0.02
RPF1-201ENST00000370654 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 ADAM17P78536 824 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 IKBKEQ14164 716 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 NEDD9Q14511 834 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 SKIV2LQ15477 1246 aaKnown RBP15.16■□□□□ 0.02
RPF1-201ENST00000370654 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 PLEKHG4Q58EX7 1191 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 SUGCTQ9HAC7 445 aa15.16■□□□□ 0.02
RPF1-201ENST00000370654 STAM2O75886 525 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 KCNA2P16389 499 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 KIF5BP33176 963 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 LIFRP42702 1097 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 TYW1BQ6NUM6 668 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 RUFY4Q6ZNE9 571 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 TMTC3Q6ZXV5 915 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 ZBTB10Q96DT7 871 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 UHRF1Q96T88 793 aaPredicted RBP15.15■□□□□ 0.02
RPF1-201ENST00000370654 RAD9AQ99638 391 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 MTA3Q9BTC8 594 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 PSTPIP2Q9H939 334 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 ANO2Q9NQ90 1003 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 PKD2L1Q9P0L9 805 aa15.15■□□□□ 0.02
RPF1-201ENST00000370654 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 GSTTP1A0A1W2PQM5 241 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
RPF1-201ENST00000370654 RASEFQ8IZ41 740 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 FANCBQ8NB91 859 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 CUL5Q93034 780 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 LZTS2Q9BRK4 669 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 C17orf80Q9BSJ5 609 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 SEC63Q9UGP8 760 aaKnown RBP15.14■□□□□ 0.01
RPF1-201ENST00000370654 BRPF3Q9ULD4 1205 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 UBIAD1Q9Y5Z9 338 aa15.14■□□□□ 0.01
RPF1-201ENST00000370654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
RPF1-201ENST00000370654 GNAQP50148 359 aa15.13■□□□□ 0.01
RPF1-201ENST00000370654 ERVK-21P61565 698 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms