RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 RPS6KA1Q15418 735 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PKN1Q16512 942 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 SEL1L2Q5TEA6 688 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 LIN9Q5TKA1 542 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 NBPF11Q86T75 865 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 ZBTB8OSQ8IWT0 167 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CNKSR2Q8WXI2 1034 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM212AQ96EL1 285 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM81BQ96LP2 452 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 GAKO14976 1311 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 SLIT2O94813 1529 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PP2D1A8MPX8 630 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 MEIS1O00470 390 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 WDR46O15213 610 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CASP1P29466 404 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 GBP2P32456 591 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 LIG4P49917 911 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 TOB1P50616 345 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 FXR2P51116 673 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 TRPC3Q13507 836 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 KCTD2Q14681 263 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 BRD3Q15059 726 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 NAALADL2Q58DX5 795 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 C8orf74Q6P047 294 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 MIS18BP1Q6P0N0 1132 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PAGR1Q9BTK6 254 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 NBPF3Q9H094 633 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 LIMA1Q9UHB6 759 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RSPH14Q9UHP6 348 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CDC23Q9UJX2 597 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 HYOU1Q9Y4L1 999 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 COBLO75128 1261 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 KIF4AO95239 1232 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 IVLP07476 585 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PSAPP07602 524 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 H2AFZP0C0S5 128 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 OSBPP22059 807 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 ACTN2P35609 894 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 POLGP54098 1239 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 KRT76Q01546 638 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 COASYQ13057 564 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PPP2R5EQ16537 467 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC144BQ3MJ40 725 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 C10orf76Q5T2E6 689 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 H2AFVQ71UI9 128 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 MAATS1Q7Z4T9 603 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 NCAPG2Q86XI2 1143 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 ADSSL1Q8N142 457 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC155Q8N6L0 562 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RDH13Q8NBN7 331 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 EEF2KMTQ96G04 330 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 RIOX1Q9H6W3 641 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 VCPKMTQ9H867 229 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 VPS18Q9P253 973 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 PRDM4Q9UKN5 801 aa5.83□□□□□ -1.48
SMNDC1-202ENST00000369603 AHDC1Q5TGY3 1603 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 A0A1B0GTH6 734 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 PSMD14O00487 310 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 SPOPO43791 374 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 NDUFA10O95299 355 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 FGRP09769 529 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 SFNP31947 248 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 GTF2A1P52655 376 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 SNAP25P60880 206 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 YWHAEP62258 255 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TBC1D10BQ4KMP7 808 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 MOXD1Q6UVY6 613 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 PAXIP1Q6ZW49 1069 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ARMC9Q7Z3E5 817 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 PEX26Q7Z412 305 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 HOOK3Q86VS8 718 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 IFT20Q8IY31 132 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ZNF710Q8N1W2 664 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC7A3Q8WY07 619 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 RABGGTAQ92696 567 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 RMDN3Q96TC7 470 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 FERMT1Q9BQL6 677 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 EDEM3Q9BZQ6 932 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TUFT1Q9NNX1 390 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 LRRC4BQ9NT99 713 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 DDX41Q9UJV9 622 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEB3A0JP26 581 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 WDR64B1ANS9 1081 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 POTECB2RU33 542 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 HARSP12081 509 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TNNI1P19237 187 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 EIF2AK2P19525 551 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 LMNB1P20700 586 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 MTMR1Q13613 665 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 RASA3Q14644 834 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 EZH2Q15910 746 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 CEP55Q53EZ4 464 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEBQ6S5H4 581 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 LDHDQ86WU2 507 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 NSUN6Q8TEA1 469 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 GMCL1Q96IK5 515 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 WRNIP1Q96S55 665 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ZNF408Q9H9D4 720 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms