RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 PAFAH1B1P43034 410 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 EPHB4P54760 987 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 MRPS25P82663 173 aaKnown RBP10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 SLC7A5Q01650 507 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 FAM83BQ5T0W9 1011 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 KLHDC7AQ5VTJ3 777 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 C8orf74Q6P047 294 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 RNF10Q8N5U6 811 aaKnown RBP10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 FAM76AQ8TAV0 307 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 TBC1D7Q9P0N9 293 aa10.98□□□□□ -0.65
PRUNE1-203ENST00000368935 GOLGA6CA6NDK9 693 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TRIM66O15016 1216 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TLR2O60603 784 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 GOLGA6DP0CG33 693 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 NAP1L1P55209 391 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 HYIQ5T013 277 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TTBK2Q6IQ55 1244 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 C10orf67Q8IYJ2 551 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 LUC7LQ9NQ29 371 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 DDX4Q9NQI0 724 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 BMP2KQ9NSY1 1161 aaPredicted RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 GOLGA6AQ9NYA3 693 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 E9PMD0 336 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 ZBTB5O15062 677 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 SHOX2O60902 331 aaPredicted RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 PPFIA4O75335 1185 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 GNA14O95837 355 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TNFRSF8P28908 595 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 SLC16A2P36021 539 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 POLR2FP61218 127 aaKnown RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 GTF2IP78347 998 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 EMBQ6PCB8 327 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TRIM59Q8IWR1 403 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 NELFCDQ8IXH7 590 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 ATP6V0A2Q9Y487 856 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 MYO3BQ8WXR4 1341 aa10.97□□□□□ -0.65
PRUNE1-203ENST00000368935 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 POTECB2RU33 542 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 USP17L10C9JJH3 530 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 PLA2G4BP0C869 781 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 MARSP56192 900 aaKnown RBP10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 CACNB1Q02641 598 aaPredicted RBP10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 CFAP221Q4G0U5 840 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 GPATCH4Q5T3I0 446 aaKnown RBP10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 GPBP1Q86WP2 473 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 PLEKHA4Q9H4M7 779 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 PSTPIP2Q9H939 334 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 PCDHA2Q9Y5H9 948 aa10.96□□□□□ -0.65
PRUNE1-203ENST00000368935 F8W031 263 aaPredicted RBP10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 SHMT1P34896 483 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 APBA1Q02410 837 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 KCTD1Q719H9 257 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 CAVIN3Q969G5 261 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 MS4A14Q96JA4 679 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 SH3GL2Q99962 352 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.66
PRUNE1-203ENST00000368935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 GOLGA8KD6RF30 607 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 MPHOSPH10O00566 681 aaKnown RBP10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 PALMO75781 387 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 BBOX1O75936 387 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 SERPINB2P05120 415 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 KLRC1P26715 233 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 EPS15P42566 896 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 NAB2Q15742 525 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 SLC18A3Q16572 532 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 HERC4Q5GLZ8 1057 aaPredicted RBP10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 TSEN2Q8NCE0 465 aaKnown RBP10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 SCFD1Q8WVM8 642 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 TBC1D5Q92609 795 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 UIMC1Q96RL1 719 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 KCTD10Q9H3F6 313 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 RNF14Q9UBS8 474 aa10.95□□□□□ -0.66
PRUNE1-203ENST00000368935 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms