RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 CUEDC2Q9H467 287 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 NFASCO94856 1347 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 DHX15O43143 795 aaKnown RBP13.84□□□□□ -0.19
TUBE1-202ENST00000368662 HOXC6P09630 235 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
TUBE1-202ENST00000368662 KRT76Q01546 638 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 KIF22Q14807 665 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 KARSQ15046 597 aaKnown RBP13.84□□□□□ -0.19
TUBE1-202ENST00000368662 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 NCAPH2Q6IBW4 605 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 ARMCX2Q7L311 632 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 MAML3Q96JK9 1138 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
TUBE1-202ENST00000368662 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.19
TUBE1-202ENST00000368662 SLFN14P0C7P3 912 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 RGS2P41220 211 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 STAT6P42226 847 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 ITGB3BPQ13352 177 aaPredicted RBP13.83□□□□□ -0.2
TUBE1-202ENST00000368662 ZSCAN23Q3MJ62 389 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 LONRF3Q496Y0 759 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 DHX58Q96C10 678 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 UIMC1Q96RL1 719 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
TUBE1-202ENST00000368662 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 MAGEF1Q9HAY2 307 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
TUBE1-202ENST00000368662 TRPA1O75762 1119 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 KCNA2P16389 499 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 MUTP22033 750 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 RPA1P27694 616 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SFNP31947 248 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 JAK3P52333 1124 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 HTRA3P83110 453 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SP3Q02447 781 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 NEDD9Q14511 834 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 E2F4Q16254 413 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 HYIQ5T013 277 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 RDM1Q8NG50 284 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 USP6NLQ92738 828 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 POLR3CQ9BUI4 534 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 STK17AQ9UEE5 414 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 A0A087X0B3 334 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 ATP9AO75110 1047 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 HSPA6P17066 643 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 CCT6AP40227 531 aaKnown RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 IRF5Q13568 498 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 EPHA7Q15375 998 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 ZRSR1Q15695 479 aaKnown RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 CAMK4Q16566 473 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 ZNF746Q6NUN9 644 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-202ENST00000368662 TINF2Q9BSI4 451 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 PKD2L1Q9P0L9 805 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 SERTAD1Q9UHV2 236 aa13.82□□□□□ -0.2
TUBE1-202ENST00000368662 LRRC37A2A6NM11 1700 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 CHMP2AO43633 222 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 PLCG1P19174 1290 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 PSMC4P43686 418 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
TUBE1-202ENST00000368662 MIER3Q7Z3K6 550 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 APBA2Q99767 749 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 EIF2AK1Q9BQI3 630 aaKnown RBP13.81□□□□□ -0.2
TUBE1-202ENST00000368662 JPH1Q9HDC5 661 aaPredicted RBP13.81□□□□□ -0.2
TUBE1-202ENST00000368662 TUFT1Q9NNX1 390 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 MYL1P05976 194 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 GRB10Q13322 594 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 TTLL4Q14679 1199 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
TUBE1-202ENST00000368662 SLC9A2Q9UBY0 812 aa13.81□□□□□ -0.2
TUBE1-202ENST00000368662 DDX39AO00148 427 aaKnown RBP13.8□□□□□ -0.2
TUBE1-202ENST00000368662 EML1O00423 815 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 XRCC5P13010 732 aaKnown RBP13.8□□□□□ -0.2
TUBE1-202ENST00000368662 TMEM119Q4V9L6 283 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 FBXO16Q8IX29 292 aaPredicted RBP13.8□□□□□ -0.2
TUBE1-202ENST00000368662 NPLOC4Q8TAT6 608 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
TUBE1-202ENST00000368662 SYCE3A1L190 88 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms