RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIF5BP33176 963 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 IRX6P78412 446 aaPredicted RBP18.49■□□□□ 0.55
CKS1B-202ENST00000368436 GRB10Q13322 594 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 NEDD9Q14511 834 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 KRT40Q6A162 431 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 METTL7BQ6UX53 244 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 RRP36Q96EU6 259 aaKnown RBP18.49■□□□□ 0.55
CKS1B-202ENST00000368436 RAD9AQ99638 391 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 ZBED2Q9BTP6 218 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 SIP14410 1827 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
CKS1B-202ENST00000368436 C17orf102A2RUQ5 167 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 MEIS2O14770 477 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 PRC1O43663 620 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 SMIM10L2AP0DMW4 78 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 SMIM10L2BP0DMW5 78 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 MCM5P33992 734 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 THPOP40225 353 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 MKRN4PQ13434 485 aaPredicted RBP18.48■□□□□ 0.55
CKS1B-202ENST00000368436 PCNX4Q63HM2 1172 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 XRRA1Q6P2D8 792 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 ATP6V0A1Q93050 837 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 UHRF1Q96T88 793 aaPredicted RBP18.48■□□□□ 0.55
CKS1B-202ENST00000368436 GPR20Q99678 358 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 LSG1Q9H089 658 aaKnown RBP18.48■□□□□ 0.55
CKS1B-202ENST00000368436 RNPEPQ9H4A4 650 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 RTEL1Q9NZ71 1219 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 MUC3AQ02505 3323 aa18.48■□□□□ 0.55
CKS1B-202ENST00000368436 RSPH10B2B2RC85 870 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 NOP56O00567 594 aaKnown RBP18.47■□□□□ 0.55
CKS1B-202ENST00000368436 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
CKS1B-202ENST00000368436 RSPH10BP0C881 870 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 GNAQP50148 359 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 TFF2Q03403 129 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 CYFIP1Q7L576 1253 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 SRBD1Q8N5C6 995 aaKnown RBP18.47■□□□□ 0.55
CKS1B-202ENST00000368436 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 SMARCC2Q8TAQ2 1214 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 TMEM87BQ96K49 555 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 SENP7Q9BQF6 1050 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 LMCD1Q9NZU5 365 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 KAT6AQ92794 2004 aa18.47■□□□□ 0.55
CKS1B-202ENST00000368436 RBAK-RBAKDNI3L0D1 243 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 TREHO43280 583 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 CAND2O75155 1236 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 LIFRP42702 1097 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 ERVK-21P61565 698 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
CKS1B-202ENST00000368436 SKIV2LQ15477 1246 aaKnown RBP18.46■□□□□ 0.55
CKS1B-202ENST00000368436 PLEKHG4Q58EX7 1191 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.46■□□□□ 0.55
CKS1B-202ENST00000368436 DBF4BQ8NFT6 615 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 CUL5Q93034 780 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
CKS1B-202ENST00000368436 COG5Q9UP83 839 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 TELO2Q9Y4R8 837 aa18.46■□□□□ 0.55
CKS1B-202ENST00000368436 NCOR1O75376 2440 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 SLC27A2O14975 620 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 PLEKHA8P1O95397 391 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 CALM1P0DP23 149 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 CALM2P0DP24 149 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 CALM3P0DP25 149 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 ADAM17P78536 824 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 NECTIN1Q15223 517 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 NLRX1Q86UT6 975 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 ESYT1Q9BSJ8 1104 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 SUGCTQ9HAC7 445 aa18.45■□□□□ 0.54
CKS1B-202ENST00000368436 LINC01553A4QN01 128 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 GNAT1P11488 350 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 KCNQ1P51787 676 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 GIMAP8Q8ND71 665 aaPredicted RBP18.44■□□□□ 0.54
CKS1B-202ENST00000368436 TGS1Q96RS0 853 aaKnown RBP18.44■□□□□ 0.54
CKS1B-202ENST00000368436 SETD4Q9NVD3 440 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 INSL6Q9Y581 213 aa18.44■□□□□ 0.54
CKS1B-202ENST00000368436 AMHP03971 560 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 HTRA4P83105 476 aaPredicted RBP18.43■□□□□ 0.54
CKS1B-202ENST00000368436 CREB3L3Q68CJ9 461 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 FAM117BQ6P1L5 589 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 TRIM50Q86XT4 487 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 CMTR1Q8N1G2 835 aaKnown RBP18.43■□□□□ 0.54
CKS1B-202ENST00000368436 GDPD5Q8WTR4 605 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 GPRASP2Q96D09 838 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 OSBPL7Q9BZF2 842 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 PSTPIP2Q9H939 334 aa18.43■□□□□ 0.54
CKS1B-202ENST00000368436 ZNF215Q9UL58 517 aaPredicted RBP18.43■□□□□ 0.54
CKS1B-202ENST00000368436 ATP9AO75110 1047 aa18.42■□□□□ 0.54
CKS1B-202ENST00000368436 RXRAP19793 462 aa18.42■□□□□ 0.54
CKS1B-202ENST00000368436 FAM26DQ5JW98 314 aa18.42■□□□□ 0.54
CKS1B-202ENST00000368436 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
CKS1B-202ENST00000368436 SP7Q8TDD2 431 aaPredicted RBP18.42■□□□□ 0.54
CKS1B-202ENST00000368436 SEPT8Q92599 483 aa18.42■□□□□ 0.54
CKS1B-202ENST00000368436 CDHR1Q96JP9 859 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms