RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GJA10Q969M2 543 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 ISCA1Q9BUE6 129 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 CFBP00751 764 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 PTK2Q05397 1052 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 NLRX1Q86UT6 975 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 EMILIN3Q9NT22 766 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 MGARPQ8TDB4 240 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 PFASO15067 1338 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 PRCPP42785 496 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 USH1GQ495M9 461 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 CHD2O14647 1828 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 GFPT2O94808 682 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 TNNI1P19237 187 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 PPP2R5AQ15172 486 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 MRPL47Q9HD33 250 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 KCND1Q9NSA2 647 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 KAT6AQ92794 2004 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 RAB3IL1Q8TBN0 382 aa12.8□□□□□ -0.36
CDC42BPA-202ENST00000366764 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 ERCC3P19447 782 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 FBXO2Q9UK22 296 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 CYP27B1O15528 508 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 USP40Q9NVE5 1235 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 CFAP73A6NFT4 308 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 TMEM232C9JQI7 657 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 H2AFXP16104 143 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 LRRD1A4D1F6 860 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 TNFAIP1Q13829 316 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 JDP2Q8WYK2 163 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 SPATS2LQ9NUQ6 558 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 HAUS2Q9NVX0 235 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 SSU72P8A0A1W2PR75 194 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 GRM4Q14833 912 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 ANKRD42Q8N9B4 389 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PLAAQ9Y263 795 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 STK38LQ9Y2H1 464 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 NWD1Q149M9 1564 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 GGPS1O95749 300 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 LMNAP02545 664 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 STAM2O75886 525 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 IFNB1P01574 187 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 SGO2Q562F6 1265 aa12.79□□□□□ -0.36
CDC42BPA-202ENST00000366764 PRKAB2O43741 272 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 SRLQ86TD4 932 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 PPM1KQ8N3J5 372 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.78□□□□□ -0.361e-7■□□□□ 10.9
CDC42BPA-202ENST00000366764 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 CUL4BQ13620 913 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 ABCB11O95342 1321 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 CXCR5P32302 372 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 ZBED4O75132 1171 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 HSP90AA5PQ58FG0 334 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 BBOX1O75936 387 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 PLTPP55058 493 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 ATP6V0A1Q93050 837 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 DCTN3O75935 186 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 FOXO4P98177 505 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 PSMD1Q99460 953 aa12.78□□□□□ -0.36
CDC42BPA-202ENST00000366764 MAP3K14Q99558 947 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 MECOMQ03112 1051 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 TTC25Q96NG3 672 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 IFT122Q9HBG6 1241 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms