RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 MIEF2Q96C03 454 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 FAM114A2Q9NRY5 505 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 BARHL2Q9NY43 387 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 ABCF2Q9UG63 623 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 DDX20Q9UHI6 824 aaKnown RBP9.98□□□□□ -0.81
SMYD3-201ENST00000366516 PCDHA6Q9UN73 950 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 PCDHA8Q9Y5H6 950 aa9.98□□□□□ -0.81
SMYD3-201ENST00000366516 COL5A2P05997 1499 aaPredicted RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 LAMB2P55268 1798 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 hCG_1984214I3L0E3 225 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 KIF3CO14782 793 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 RAD51CO43502 376 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 BUB1O43683 1085 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 FAM153BP0C7A2 387 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 GRM4Q14833 912 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 FAM153CQ494X1 144 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 HGSNATQ68CP4 663 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 CPLX4Q7Z7G2 160 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 STAG2Q8N3U4 1231 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 KIAA0895Q8NCT3 520 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 TBC1D22AQ8WUA7 517 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 ANKS1AQ92625 1134 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 SEC16BQ96JE7 1060 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 NSRP1Q9H0G5 558 aaKnown RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 STMN4Q9H169 189 aaPredicted RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 SEMA6BQ9H3T3 888 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 CD248Q9HCU0 757 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 PRDM11Q9NQV5 511 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 FAM153AQ9UHL3 310 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 COL4A3BPQ9Y5P4 624 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 NUP98P52948 1817 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
SMYD3-201ENST00000366516 FAM205AQ6ZU69 1335 aa9.97□□□□□ -0.81
SMYD3-201ENST00000366516 A0A1B0GUL6 1792 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 GBP1P32455 592 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 EPS15P42566 896 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 SCTRP47872 440 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 USP11P51784 963 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 SEC24CP53992 1094 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 UBE4AQ14139 1066 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 ITIH4Q14624 930 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 TXNRD1Q16881 649 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 INF2Q27J81 1249 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 KIAA0753Q2KHM9 967 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 RCSD1Q6JBY9 416 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.81
SMYD3-201ENST00000366516 NEK8Q86SG6 692 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 VPS36Q86VN1 386 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 CEP57Q86XR8 500 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 SYNE4Q8N205 404 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 CCDC197Q8NCU1 140 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.81
SMYD3-201ENST00000366516 TATDN2Q93075 761 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 MS4A14Q96JA4 679 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 PSMD1Q99460 953 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 MOV10L1Q9BXT6 1211 aaKnown RBP9.96□□□□□ -0.81
SMYD3-201ENST00000366516 RAB17Q9H0T7 212 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 TMEM60Q9H2L4 133 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 DIS3Q9Y2L1 958 aaKnown RBP9.96□□□□□ -0.81
SMYD3-201ENST00000366516 UTP11Q9Y3A2 253 aaKnown RBP9.96□□□□□ -0.81
SMYD3-201ENST00000366516 TOGARAM1Q9Y4F4 1720 aa9.96□□□□□ -0.81
SMYD3-201ENST00000366516 MAST2Q6P0Q8 1798 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 CACNA1SQ13698 1873 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 ESYT3A0FGR9 886 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 PP2D1A8MPX8 630 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 USP17L12C9JPN9 530 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 USP17L21D6R901 530 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 SART1O43290 800 aaKnown RBP9.96□□□□□ -0.82
SMYD3-201ENST00000366516 SLC26A4O43511 780 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 MGRN1O60291 552 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 FCER1AP12319 257 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 MARSP56192 900 aaKnown RBP9.96□□□□□ -0.82
SMYD3-201ENST00000366516 LMNB2Q03252 620 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 ZNF844Q08AG5 666 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 RIPK1Q13546 671 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 ASIC2Q16515 512 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 FAM83BQ5T0W9 1011 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
SMYD3-201ENST00000366516 CEP120Q8N960 986 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 PNMA1Q8ND90 353 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 CHMP6Q96FZ7 201 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 NAP1L3Q99457 506 aaPredicted RBP9.96□□□□□ -0.82
SMYD3-201ENST00000366516 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.96□□□□□ -0.826e-7■□□□□ 8.8
SMYD3-201ENST00000366516 ZMYND12Q9H0C1 365 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 ZNF287Q9HBT7 754 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 EHD2Q9NZN4 543 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 AIPL1Q9NZN9 384 aa9.96□□□□□ -0.82
SMYD3-201ENST00000366516 COL1A1P02452 1464 aaPredicted RBP9.95□□□□□ -0.82
SMYD3-201ENST00000366516 SRCAPQ6ZRS2 3230 aa9.95□□□□□ -0.82
SMYD3-201ENST00000366516 H0YGN5 161 aa9.95□□□□□ -0.82
SMYD3-201ENST00000366516 KCNK3O14649 394 aa9.95□□□□□ -0.82
SMYD3-201ENST00000366516 ASAP2O43150 1006 aa9.95□□□□□ -0.82
SMYD3-201ENST00000366516 CCNT1O60563 726 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms