RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 C11orf84Q9BUA3 381 aaPredicted RBP6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZCCHC4Q9H5U6 513 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 WASF3Q9UPY6 502 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 TELO2Q9Y4R8 837 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 TCRBV5S4A2TA0A5A2 114 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 FAM47E-STBD1D6RA91 191 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 KRIT1O00522 736 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 AQP7O14520 342 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 PYGMP11217 842 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 GABREP78334 506 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 JMYQ8N9B5 988 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 PCDH19Q8TAB3 1148 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 SLC7A14Q8TBB6 771 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 TOE1Q96GM8 510 aaKnown RBP6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 DTLQ9NZJ0 730 aa6.89□□□□□ -1.31
RNU4-28P-201ENST00000364739 RASGRP1O95267 797 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 SLURP1P55000 103 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 ITGA1P56199 1179 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 NKX3-2P78367 333 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 RBM10P98175 930 aaKnown RBP6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 SPIRE1Q08AE8 756 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 PAK1Q13153 545 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 TUSC3Q13454 348 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 NFE2L2Q16236 605 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 C2orf27AQ580R0 203 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 PHF19Q5T6S3 580 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 ZC3H18Q86VM9 953 aaKnown RBP6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 OSTM1Q86WC4 334 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 SH3RF2Q8TEC5 729 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 ZSWIM3Q96MP5 696 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 KCNC2Q96PR1 638 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 SPATA25Q9BR10 227 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 CD244Q9BZW8 370 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 PARD6AQ9NPB6 346 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 DSEQ9UL01 958 aa6.88□□□□□ -1.31
RNU4-28P-201ENST00000364739 OTOL1A6NHN0 477 aaPredicted RBP6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 KCNK3O14649 394 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 SQSTM1Q13501 440 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 TMC5Q6UXY8 1006 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 LINC00482Q8N8I6 264 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 ZSWIM2Q8NEG5 633 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 SCLYQ96I15 445 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 CBLCQ9ULV8 474 aa6.87□□□□□ -1.31
RNU4-28P-201ENST00000364739 MAFKO60675 156 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 RAPGEF3O95398 923 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 KRT15P19012 456 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 HOXA5P20719 270 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 DNM2P50570 870 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 CTSWP56202 376 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 ADAM9Q13443 819 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 RTP5Q14D33 572 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 HABP4Q5JVS0 413 aaKnown RBP6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 FGD2Q7Z6J4 655 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 ZC3H7AQ8IWR0 971 aaKnown RBP6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 KYQ8NBH2 561 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 UHMK1Q8TAS1 419 aaKnown RBP6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 SH3TC2Q8TF17 1288 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
RNU4-28P-201ENST00000364739 ARVCFO00192 962 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 AMY2AP04746 511 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 PDE6AP16499 860 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 AMY2BP19961 511 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 JAM2P57087 298 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 ZC3H12BQ5HYM0 836 aaKnown RBP6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 ARHGAP36Q6ZRI8 547 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 CARFQ8N187 725 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 FBXW5Q969U6 566 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 XYLT2Q9H1B5 865 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 COQ6Q9Y2Z9 468 aa6.85□□□□□ -1.31
RNU4-28P-201ENST00000364739 CCDC66A2RUB6 948 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 SH3D21A4FU49 640 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 ACOT7O00154 380 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 SASH1O94885 1247 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 THBS2P35442 1172 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 KCNC1P48547 511 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 SARSP49591 514 aaKnown RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 ST5P78524 1137 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 PAN2Q504Q3 1202 aaKnown RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 CYP4F22Q6NT55 531 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 KCTD1Q719H9 257 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 BRAPQ7Z569 592 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 PROSER1Q86XN7 944 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 PTRH1Q86Y79 214 aaKnown RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 TRIM48Q8IWZ4 208 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms