RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 LRRC45Q96CN5 670 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 HOOK2Q96ED9 719 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 EEF1GP26641 437 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 FLT3P36888 993 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 RANBP1P43487 201 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 SESN3P58005 492 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 STAG2Q8N3U4 1231 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 CHMP6Q96FZ7 201 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 TSC22D3Q99576 134 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 OSBPL1AQ9BXW6 950 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 SEPT11Q9NVA2 429 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 SNUPNO95149 360 aaKnown RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 GNAT2P19087 354 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 C6orf89Q6UWU4 347 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
VAMP1-201ENST00000361716 WHAMMQ8TF30 809 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
VAMP1-201ENST00000361716 USP17L3A6NCW0 530 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 USP17L4A6NCW7 530 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 BMP15O95972 392 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 SRGNP10124 158 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 FECHP22830 423 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 TCERG1LQ5VWI1 586 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 OTUD6AQ7L8S5 288 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 USP17L1Q7RTZ2 530 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 BLIDQ8IZY5 108 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 OVOS2A0A0G2JMS6 1433 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 PKN1Q16512 942 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 CCDC25Q86WR0 208 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ADSSL1Q8N142 457 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
VAMP1-201ENST00000361716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
VAMP1-201ENST00000361716 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 HSPA1LP34931 641 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 FAM47EQ6ZV65 393 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 SH3RF1Q7Z6J0 888 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 CABP7Q86V35 215 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ANKRD42Q8N9B4 389 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 TBC1D5Q92609 795 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 ABCF3Q9NUQ8 709 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 TRIM33Q9UPN9 1127 aa13.89□□□□□ -0.19
VAMP1-201ENST00000361716 IGF2BP3O00425 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 KRIT1O00522 736 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 CHN1P15882 459 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 PLCG1P19174 1290 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 STK4Q13043 487 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 RCSD1Q6JBY9 416 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 DAAM2Q86T65 1068 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 LRRC34Q8IZ02 419 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 ZNF444Q8N0Y2 327 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 GJA10Q969M2 543 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 GNAT1P11488 350 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 NEFHP12036 1026 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 LLGL1Q15334 1064 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 DDB1Q16531 1140 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 TLDC1Q6P9B6 456 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 SLC30A9Q6PML9 568 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 ELOA2Q8IYF1 753 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 PSMD1Q99460 953 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 PRMT1Q99873 361 aaKnown RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
VAMP1-201ENST00000361716 SWAP70Q9UH65 585 aa13.88□□□□□ -0.19
VAMP1-201ENST00000361716 GOLGA6L10A0A0M3HER8 536 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 TRAF5O00463 557 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 CLSTN1O94985 981 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 COPB2P35606 906 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 RWDD2BP57060 319 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 SLC8A3P57103 927 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ADCY2Q08462 1091 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 GRIK3Q13003 919 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 FBXL16Q8N461 479 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 CCDC26Q8TAB7 109 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ZNF570Q96NI8 536 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 PAIP2Q9BPZ3 127 aaKnown RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 LRRC4CQ9HCJ2 640 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms