RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 A0A1W2PRG0 241 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 K7ERI5 159 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
CTR9-201ENST00000361367 SRGAP2CP0DJJ0 459 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 DDIT3P35638 169 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 PDE6CP51160 858 aa15.19■□□□□ 0.02
CTR9-201ENST00000361367 SFI1A8K8P3 1242 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 LACTBP83111 547 aaPredicted RBP15.18■□□□□ 0.02
CTR9-201ENST00000361367 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
CTR9-201ENST00000361367 NLRP4Q96MN2 994 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 TEX13BQ9BXU2 312 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 AFPP02771 609 aaKnown RBP15.18■□□□□ 0.02
CTR9-201ENST00000361367 USP11P51784 963 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 PEX3P56589 373 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 NEDD9Q14511 834 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 SAMSN1Q9NSI8 373 aaKnown RBP15.18■□□□□ 0.02
CTR9-201ENST00000361367 PDHBP11177 359 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 C8orf74Q6P047 294 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 PPP1R16BQ96T49 567 aa15.18■□□□□ 0.02
CTR9-201ENST00000361367 IQCGQ9H095 443 aaKnown RBP15.18■□□□□ 0.02
CTR9-201ENST00000361367 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 DDR1Q08345 913 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
CTR9-201ENST00000361367 PARP2Q9UGN5 583 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 HOXA7P31268 230 aaPredicted RBP15.17■□□□□ 0.02
CTR9-201ENST00000361367 CASP14P31944 242 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 COPB2P35606 906 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 NFIAQ12857 509 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 FAM167AQ96KS9 214 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 MMP19Q99542 508 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 SENP2Q9HC62 589 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 ANAPC4Q9UJX5 808 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 POTECB2RU33 542 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 E9PMD0 336 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 TLR3O15455 904 aaKnown RBP15.17■□□□□ 0.02
CTR9-201ENST00000361367 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 CUL4BQ13620 913 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 ALCAMQ13740 583 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 UNC13DQ70J99 1090 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 PRR12Q9ULL5 1215 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 GDAQ9Y2T3 454 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
CTR9-201ENST00000361367 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
CTR9-201ENST00000361367 CARD6Q9BX69 1037 aa15.17■□□□□ 0.02
CTR9-201ENST00000361367 PABPN1LA6NDY0 278 aaKnown RBP15.16■□□□□ 0.02
CTR9-201ENST00000361367 LPXNO60711 386 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 PTK2Q05397 1052 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 PPP1R14CQ8TAE6 165 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 DYDC2Q96IM9 177 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 PSMD1Q99460 953 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 MED10Q9BTT4 135 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 TSKSQ9UJT2 592 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 RRP9O43818 475 aaKnown RBP15.16■□□□□ 0.02
CTR9-201ENST00000361367 MFAP3P55082 362 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 LRRC63Q05C16 580 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 ANKRD36BP1Q96IX9 119 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 CASP1P29466 404 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 SFNP31947 248 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 NEK9Q8TD19 979 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 QARSP47897 775 aaKnown RBP15.16■□□□□ 0.02
CTR9-201ENST00000361367 BPIFB4P59827 614 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 CXCL9Q07325 125 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 ZBTB33Q86T24 672 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 LRRC8AQ8IWT6 810 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 FAM204AQ9H8W3 233 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
CTR9-201ENST00000361367 EPN1Q9Y6I3 576 aaPredicted RBP15.16■□□□□ 0.02
CTR9-201ENST00000361367 TLDC2A0PJX2 215 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 PP2D1A8MPX8 630 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 P4HBP07237 508 aaKnown RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 ATP2A2P16615 1042 aaKnown RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 OSTNP61366 133 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 TXNDC16Q9P2K2 825 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 AMFRQ9UKV5 643 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 OPA1O60313 960 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 CTNND1O60716 968 aaKnown RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 MXI1P50539 228 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 ATP2C1P98194 919 aaPredicted RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 TRIM58Q8NG06 486 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 POTEFA5A3E0 1075 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 ACTN4O43707 911 aaKnown RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
CTR9-201ENST00000361367 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
CTR9-201ENST00000361367 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms