RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 A0A1W2PQC6 194 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 ESYT2A0FGR8 921 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 FRMD3A2A2Y4 597 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 KLRG2A4D1S0 409 aaPredicted RBP17.87■□□□□ 0.45
IFT140-201ENST00000361339 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
IFT140-201ENST00000361339 ACTN3Q08043 901 aaPredicted RBP17.87■□□□□ 0.45
IFT140-201ENST00000361339 TRIM14Q14142 442 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 SH3BP5LQ7L8J4 393 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 RAD54LQ92698 747 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 EHD2Q9NZN4 543 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 G3V3G9 751 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 KIAA0754O94854 1291 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 SCP2P22307 547 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 GBP6Q6ZN66 633 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 NELFCDQ8IXH7 590 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
IFT140-201ENST00000361339 AARSP49588 968 aaKnown RBP eCLIP17.86■□□□□ 0.45
IFT140-201ENST00000361339 SF3A3Q12874 501 aaKnown RBP eCLIP17.86■□□□□ 0.45
IFT140-201ENST00000361339 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
IFT140-201ENST00000361339 RUFY1Q96T51 708 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
IFT140-201ENST00000361339 POTEB3A0JP26 581 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 POTECB2RU33 542 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 MYL1P05976 194 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 CRKP46108 304 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 FXR2P51116 673 aaKnown RBP eCLIP17.86■□□□□ 0.45
IFT140-201ENST00000361339 QRICH1Q2TAL8 776 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 CENPPQ6IPU0 288 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 POTEBQ6S5H4 581 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 TRAPPC11Q7Z392 1133 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 CUEDC2Q9H467 287 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 PSTPIP2Q9H939 334 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 RIC8AQ9NPQ8 531 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 DMGDHQ9UI17 866 aaKnown RBP17.86■□□□□ 0.45
IFT140-201ENST00000361339 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
IFT140-201ENST00000361339 PLIN4Q96Q06 1357 aa17.86■□□□□ 0.45
IFT140-201ENST00000361339 MARCH6O60337 910 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 ATP2C2O75185 946 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 MMP10P09238 476 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 CLK2P49760 499 aaKnown RBP17.85■□□□□ 0.45
IFT140-201ENST00000361339 SEPT2Q15019 361 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 SWT1Q5T5J6 900 aaKnown RBP17.85■□□□□ 0.45
IFT140-201ENST00000361339 CNNM4Q6P4Q7 775 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 CCNI2Q6ZMN8 369 aaPredicted RBP17.85■□□□□ 0.45
IFT140-201ENST00000361339 KIRREL3Q8IZU9 778 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 MMRN2Q9H8L6 949 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 ANKRD31Q8N7Z5 1873 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 PPFIA1Q13136 1202 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 TUBB2AQ13885 445 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 USH1GQ495M9 461 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 UNC13DQ70J99 1090 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 ANKRD13CQ8N6S4 541 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 GIMAP7Q8NHV1 300 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 TUBB2BQ9BVA1 445 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 MYH7BA7E2Y1 1941 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 MEA1Q16626 185 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 KRT79Q5XKE5 535 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 CEP57Q86XR8 500 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 LRRC1Q9BTT6 524 aa17.85■□□□□ 0.45
IFT140-201ENST00000361339 BICDL2A1A5D9 508 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 MEIS1O00470 390 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 ZBTB5O15062 677 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 EIF3HO15372 352 aaKnown RBP eCLIP17.84■□□□□ 0.45
IFT140-201ENST00000361339 KRT14P02533 472 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 SMARCA1P28370 1054 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 TMEM266Q2M3C6 531 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 VIPAS39Q9H9C1 493 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 MLXIPQ9HAP2 919 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 ARHGAP20Q9P2F6 1191 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 FAM198AQ9UFP1 575 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 AMPD3Q01432 767 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 GUCY1A3Q02108 690 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 TSR1Q2NL82 804 aaKnown RBP17.84■□□□□ 0.45
IFT140-201ENST00000361339 LRRC55Q6ZSA7 311 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 CCDC47Q96A33 483 aaKnown RBP17.84■□□□□ 0.45
IFT140-201ENST00000361339 DNAJC19Q96DA6 116 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 NDST4Q9H3R1 872 aa17.84■□□□□ 0.45
IFT140-201ENST00000361339 SEC24CP53992 1094 aa17.83■□□□□ 0.45
IFT140-201ENST00000361339 GSCP56915 257 aaPredicted RBP17.83■□□□□ 0.45
IFT140-201ENST00000361339 CUL5Q93034 780 aa17.83■□□□□ 0.45
IFT140-201ENST00000361339 ZHX3Q9H4I2 956 aa17.83■□□□□ 0.45
IFT140-201ENST00000361339 SIK3Q9Y2K2 1263 aa17.83■□□□□ 0.45
IFT140-201ENST00000361339 PCDHA1Q9Y5I3 950 aa17.83■□□□□ 0.45
IFT140-201ENST00000361339 RDXP35241 583 aaKnown RBP17.83■□□□□ 0.44
IFT140-201ENST00000361339 COASYQ13057 564 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 RRP1BQ14684 758 aaKnown RBP17.83■□□□□ 0.44
IFT140-201ENST00000361339 TMEM119Q4V9L6 283 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 TMC4Q7Z404 712 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 SPICE1Q8N0Z3 855 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 MSL3Q8N5Y2 521 aaKnown RBP17.83■□□□□ 0.44
IFT140-201ENST00000361339 MAGEF1Q9HAY2 307 aa17.83■□□□□ 0.44
IFT140-201ENST00000361339 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms