RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 SEC23AQ15436 765 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 ARMC9Q7Z3E5 817 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 FAM114A2Q9NRY5 505 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 BZW2Q9Y6E2 419 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 MYBL2P10244 700 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 MAGOHP61326 146 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 AMPD2Q01433 879 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 SPATA20Q8TB22 786 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 GJA10Q969M2 543 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 MAGOHBQ96A72 148 aaKnown RBP13.1□□□□□ -0.31
EPHB4-202ENST00000360620 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 FMO2Q99518 471 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 KLC4Q9NSK0 619 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 DAAM1Q9Y4D1 1078 aa13.1□□□□□ -0.31
EPHB4-202ENST00000360620 PBX1P40424 430 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
EPHB4-202ENST00000360620 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 NAP1L4Q99733 375 aaKnown RBP13.09□□□□□ -0.31
EPHB4-202ENST00000360620 ASIC3Q9UHC3 531 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 MARF1Q9Y4F3 1742 aaKnown RBP13.09□□□□□ -0.31
EPHB4-202ENST00000360620 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 ATP11AP98196 1134 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 SEMA3FQ13275 785 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 HOMER3Q9NSC5 361 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-202ENST00000360620 BIRC3Q13489 604 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC6Q16204 474 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 PPP2R5EQ16537 467 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 MED15Q96RN5 788 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 PCDHA6Q9UN73 950 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 PCDHA8Q9Y5H6 950 aa13.09□□□□□ -0.31
EPHB4-202ENST00000360620 ORC4O43929 436 aa13.08□□□□□ -0.31
EPHB4-202ENST00000360620 GJC1P36383 396 aa13.08□□□□□ -0.31
EPHB4-202ENST00000360620 SLCO1A2P46721 670 aa13.08□□□□□ -0.31
EPHB4-202ENST00000360620 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.31
EPHB4-202ENST00000360620 OR2W6PQ8NHA6 318 aa13.08□□□□□ -0.31
EPHB4-202ENST00000360620 CCDC188H7C350 402 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 PSMD2Q13200 908 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 FMNL3Q8IVF7 1028 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 TRIM7Q9C029 511 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-202ENST00000360620 SSU72P8A0A1W2PR75 194 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 CHMP2AO43633 222 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 FAM133BQ5BKY9 247 aaKnown RBP13.08□□□□□ -0.32
EPHB4-202ENST00000360620 RPAINQ86UA6 219 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 PSTPIP2Q9H939 334 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 FBXL5Q9UKA1 691 aa13.08□□□□□ -0.32
EPHB4-202ENST00000360620 GRID2IPA4D2P6 1211 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 ATP5DP30049 168 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 HDLBPQ00341 1268 aaKnown RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.322e-9■■■■■ 36
EPHB4-202ENST00000360620 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 A0A1W2PQJ5 194 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 FGGP02679 453 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 KLRC1P26715 233 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 SIK1P57059 783 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 DAPK3O43293 454 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 GFPT2O94808 682 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 ERFEQ4G0M1 354 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 PROM2Q8N271 834 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
EPHB4-202ENST00000360620 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
EPHB4-202ENST00000360620 ZSCAN5CA6NGD5 496 aaPredicted RBP13.06□□□□□ -0.32
EPHB4-202ENST00000360620 SART1O43290 800 aaKnown RBP13.06□□□□□ -0.32
EPHB4-202ENST00000360620 RAD51CO43502 376 aa13.06□□□□□ -0.32
EPHB4-202ENST00000360620 EXOC3O60645 756 aa13.06□□□□□ -0.32
EPHB4-202ENST00000360620 GCKP35557 465 aa13.06□□□□□ -0.32
EPHB4-202ENST00000360620 GRM4Q14833 912 aa13.06□□□□□ -0.32
EPHB4-202ENST00000360620 PTGISQ16647 500 aa13.06□□□□□ -0.32
EPHB4-202ENST00000360620 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms