RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 MYCBPAPQ8TBZ2 947 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 SNX29Q8TEQ0 813 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 LRRC45Q96CN5 670 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 NUP188Q5SRE5 1749 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 LAD1O00515 517 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 FCER1AP12319 257 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 MDH1P40925 334 aaKnown RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 NT5C2P49902 561 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 SBK1Q52WX2 424 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 ZNF772Q68DY9 489 aaPredicted RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 TMED8Q6PL24 325 aaPredicted RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
RNF40-202ENST00000357890 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
RNF40-202ENST00000357890 OPLAHO14841 1288 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 KRT13P13646 458 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 EIF4A3P38919 411 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 PMS1P54277 932 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 FUT2Q10981 343 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 PICALMQ13492 652 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 CRYMQ14894 314 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 TAF11Q15544 211 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 TBC1D9BQ66K14 1250 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 MAEAQ7L5Y9 396 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 FNBP4Q8N3X1 1017 aaPredicted RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 FBF1Q8TES7 1133 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 SGSM3Q96HU1 749 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 SH3GL3Q99963 347 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 ELAC2Q9BQ52 826 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 TMEM60Q9H2L4 133 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 CAPN11Q9UMQ6 739 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 PLCG2P16885 1265 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 SMTNP53814 917 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 CALCRLQ16602 461 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 PTGISQ16647 500 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 NEK8Q86SG6 692 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 TSEN2Q8NCE0 465 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 L3MBTL1Q9Y468 752 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 TARSL2A2RTX5 802 aaKnown RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 ZSCAN5CA6NGD5 496 aaPredicted RBP10.93□□□□□ -0.66
RNF40-202ENST00000357890 ANKRD40Q6AI12 368 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 USP17L2Q6R6M4 530 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 TRAPPC11Q7Z392 1133 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 ANKRD42Q8N9B4 389 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 RETREG2Q8NC44 543 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 CUEDC2Q9H467 287 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 SWAP70Q9UH65 585 aa10.93□□□□□ -0.66
RNF40-202ENST00000357890 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
RNF40-202ENST00000357890 F8W031 263 aaPredicted RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 RANBP1P43487 201 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 STK4Q13043 487 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 SLC9C1Q4G0N8 1177 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 KLHL29Q96CT2 875 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 STAMBPL1Q96FJ0 436 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 AK8Q96MA6 479 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 EYA3Q99504 573 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 LBHD1Q9BQE6 289 aaPredicted RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 KLRK1P26718 216 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 SLCO1A2P46721 670 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
RNF40-202ENST00000357890 KIF11P52732 1056 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 MAGOHP61326 146 aaKnown RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 EVX2Q03828 476 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 ADCY1Q08828 1119 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 TBCKQ8TEA7 893 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 MAGOHBQ96A72 148 aaKnown RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 GJD4Q96KN9 370 aaPredicted RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 ATP6V1G3Q96LB4 118 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 OSBPL9Q96SU4 736 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 TSC22D3Q99576 134 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 NDST4Q9H3R1 872 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 MAGEF1Q9HAY2 307 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 PRPF6O94906 941 aaKnown RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 GSCP56915 257 aaPredicted RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 C12orf60Q5U649 245 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 DAAM2Q86T65 1068 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 CCDC155Q8N6L0 562 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 AP1M1Q9BXS5 423 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 LRRC27Q9C0I9 530 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 RBM12Q9NTZ6 932 aaKnown RBP10.92□□□□□ -0.66
RNF40-202ENST00000357890 ATP8A1Q9Y2Q0 1164 aa10.92□□□□□ -0.66
RNF40-202ENST00000357890 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 A0A1W2PQC6 194 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 HIP1RO75146 1068 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms