RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 UBIAD1Q9Y5Z9 338 aa19.23■□□□□ 0.67
PDLIM7-201ENST00000355572 NBNO60934 754 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 ARHGEF15O94989 841 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 PKN1Q16512 942 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 TIFAQ96CG3 184 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 NKX2-4Q9H2Z4 354 aa19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 NAP1L2Q9ULW6 460 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-201ENST00000355572 STAM2O75886 525 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 CKBP12277 381 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 HOXC8P31273 242 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 CLK2P49760 499 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 NAPAP54920 295 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 RBL2Q08999 1139 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 TOB2Q14106 344 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 NTRK3Q16288 839 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 BLOC1S2Q6QNY1 142 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 METTL7BQ6UX53 244 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 TMCO2Q7Z6W1 182 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 C7orf31Q8N865 590 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 USP26Q9BXU7 913 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 ZNF576Q9H609 170 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 NOD1Q9Y239 953 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 CHD9Q3L8U1 2897 aa19.21■□□□□ 0.67
PDLIM7-201ENST00000355572 COL4A4P53420 1690 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 H3BRB1 525 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 SMIM10L2AP0DMW4 78 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 SMIM10L2BP0DMW5 78 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 METAP2P50579 478 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 ZNF618Q5T7W0 954 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 UTP14CQ5TAP6 766 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 LRRC8DQ7L1W4 858 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 SPRED2Q7Z698 418 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 PHKBQ93100 1093 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 KATNAL1Q9BW62 490 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 RNPEPQ9H4A4 650 aa19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 TUT1Q9H6E5 874 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 NCOA5Q9HCD5 579 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-201ENST00000355572 GSTTP1A0A1W2PQM5 241 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 TREHO43280 583 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 DTNBO60941 627 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 HMGB1P09429 215 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 NEDD9Q14511 834 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 RPUSD2Q8IZ73 545 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 GPRASP2Q96D09 838 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 PCYT2Q99447 389 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 ANO3Q9BYT9 981 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
PDLIM7-201ENST00000355572 TMEM265A0A087WTH1 108 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SMCO2A6NFE2 343 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 NEFLP07196 543 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 ARP10275 920 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SELPP16109 830 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 RCAN1P53805 252 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 ADAM17P78536 824 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 PTK7Q13308 1070 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 BFSP2Q13515 415 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 ADGRE1Q14246 886 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 FBXL16Q8N461 479 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 USP38Q8NB14 1042 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 RETREG2Q8NC44 543 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SLC17A8Q8NDX2 589 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 CAGE1Q8TC20 777 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 AFAP1L1Q8TED9 768 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SENP7Q9BQF6 1050 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 PRDM12Q9H4Q4 367 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 JADE2Q9NQC1 790 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SETD4Q9NVD3 440 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SLC4A7Q9Y6M7 1214 aa19.18■□□□□ 0.66
PDLIM7-201ENST00000355572 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 EDIL3O43854 480 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 REC8O95072 547 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 PDIA3P30101 505 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 RFC2P35250 354 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 ADCY7P51828 1080 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 CCT2P78371 535 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 DEFB103AP81534 67 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 PFKFB3Q16875 520 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 PPP1R18Q6NYC8 613 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 NLRX1Q86UT6 975 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 SERINC5Q86VE9 423 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 CRYGNQ8WXF5 182 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 ZBTB10Q96DT7 871 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 UIMC1Q96RL1 719 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 UPF3BQ9BZI7 483 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
PDLIM7-201ENST00000355572 CHD7Q9P2D1 2997 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 NOP56O00567 594 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 CXCL10P02778 98 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 PFKMP08237 780 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 SCG2P13521 617 aa19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 ATP2A2P16615 1042 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 TCF7P36402 384 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-201ENST00000355572 EVCP57679 992 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms