RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CUL5Q93034 780 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 HIPK3Q9H422 1215 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 FIBPO43427 364 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 CTDNEP1O95476 244 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 DDIT3P35638 169 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 PSEN2P49810 448 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 ADCY7P51828 1080 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 SCRN1Q12765 414 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 FAM47CQ5HY64 1035 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 JAKMIP3Q5VZ66 844 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 GPR20Q99678 358 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
RAB5C-201ENST00000346213 ARP10275 920 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 MCM2P49736 904 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 AK2P54819 239 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 SP4Q02446 784 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 NBR1Q14596 966 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 DGKDQ16760 1214 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 TCTN1Q2MV58 587 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 TMEM240Q5SV17 173 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 NFRKBQ6P4R8 1299 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 UIMC1Q96RL1 719 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 ALG1Q9BT22 464 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 ZMYND12Q9H0C1 365 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 GJB4Q9NTQ9 266 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 MYH7BA7E2Y1 1941 aa18.4■□□□□ 0.54
RAB5C-201ENST00000346213 TGFB3P10600 412 aa18.39■□□□□ 0.53
RAB5C-201ENST00000346213 NEK4P51957 841 aa18.39■□□□□ 0.53
RAB5C-201ENST00000346213 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
RAB5C-201ENST00000346213 MFSD10Q14728 455 aa18.39■□□□□ 0.53
RAB5C-201ENST00000346213 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
RAB5C-201ENST00000346213 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
RAB5C-201ENST00000346213 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.53
RAB5C-201ENST00000346213 FAM86B1E9PN63 330 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 TLR3O15455 904 aaKnown RBP18.38■□□□□ 0.53
RAB5C-201ENST00000346213 LGALS2P05162 132 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 FAM86B2P0C5J1 330 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 SREBF1P36956 1147 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 NFKBIBQ15653 356 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 TRIM71Q2Q1W2 868 aaKnown RBP18.38■□□□□ 0.53
RAB5C-201ENST00000346213 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 METTL7BQ6UX53 244 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 ZNF274Q96GC6 653 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-201ENST00000346213 RNF26Q9BY78 433 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-201ENST00000346213 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 CIZ1Q9ULV3 898 aaPredicted RBP18.38■□□□□ 0.53
RAB5C-201ENST00000346213 SCN5AQ14524 2016 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 GSTTP1A0A1W2PQM5 241 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 ESYT2A0FGR8 921 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 STAM2O75886 525 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 HOXC8P31273 242 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 GPRASP2Q96D09 838 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 PCYT2Q99447 389 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
RAB5C-201ENST00000346213 IGLV3-22A0A075B6J6 115 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 GRXCR1A8MXD5 290 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 hCG_1984214I3L0E3 225 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 KPNA6O60684 536 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 XRRA1Q6P2D8 792 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 KCNV1Q6PIU1 500 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 ZNF713Q8N859 430 aaPredicted RBP18.37■□□□□ 0.53
RAB5C-201ENST00000346213 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 MXRA8Q9BRK3 442 aa18.37■□□□□ 0.53
RAB5C-201ENST00000346213 TANC1Q9C0D5 1861 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 PPFIA4O75335 1185 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
RAB5C-201ENST00000346213 MTMR1Q13613 665 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
RAB5C-201ENST00000346213 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 KCNH7Q9NS40 1196 aa18.36■□□□□ 0.53
RAB5C-201ENST00000346213 M0R2N6 131 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 ARHGAP4P98171 946 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 MBTPS1Q14703 1052 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 PTGISQ16647 500 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 ME3Q16798 604 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 LENG9Q96B70 501 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
RAB5C-201ENST00000346213 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
RAB5C-201ENST00000346213 PFKFB2O60825 505 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 CCNE2O96020 404 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 PTPN11Q06124 597 aaPredicted RBP18.34■□□□□ 0.53
RAB5C-201ENST00000346213 RNPEPQ9H4A4 650 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 AGO4Q9HCK5 861 aaKnown RBP18.34■□□□□ 0.53
RAB5C-201ENST00000346213 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 MEIS1O00470 390 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 SMIM10L2AP0DMW4 78 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 SMIM10L2BP0DMW5 78 aa18.34■□□□□ 0.53
RAB5C-201ENST00000346213 FDPSP14324 419 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms