RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 KRIT1O00522 736 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 PPEF1O14829 653 aaPredicted RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 KCNJ6P48051 423 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 ABCB5Q2M3G0 1257 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 COA7Q96BR5 231 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
SRPK1-201ENST00000346162 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
SRPK1-201ENST00000346162 AGLP35573 1532 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 H0Y3Z8 333 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 MYL1P05976 194 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 ARL6IP4Q66PJ3 421 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 MSANTD4Q8NCY6 345 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 ZNF609O15014 1411 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 SKAP2O75563 359 aaPredicted RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 STRN3Q13033 797 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 DRP2Q13474 957 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 TMC4Q7Z404 712 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 NCOA3Q9Y6Q9 1424 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 CNOT10Q9H9A5 744 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 NFU1Q9UMS0 254 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 MRPL11Q9Y3B7 192 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 PPP1R37O75864 691 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 SNUPNO95149 360 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 CYP2D6P10635 497 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 SLC16A2P36021 539 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 CCDC92Q53HC0 331 aaPredicted RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
SRPK1-201ENST00000346162 U2AF1L4Q8WU68 220 aaKnown RBP16.84■□□□□ 0.29
SRPK1-201ENST00000346162 SRGAP2O75044 1071 aa16.83■□□□□ 0.29
SRPK1-201ENST00000346162 USP14P54578 494 aa16.83■□□□□ 0.29
SRPK1-201ENST00000346162 SGMS1Q86VZ5 419 aa16.83■□□□□ 0.29
SRPK1-201ENST00000346162 FGD4Q96M96 766 aa16.83■□□□□ 0.29
SRPK1-201ENST00000346162 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.29
SRPK1-201ENST00000346162 CHCHD3Q9NX63 227 aaKnown RBP16.83■□□□□ 0.29
SRPK1-201ENST00000346162 PDIA6Q15084 440 aa16.83■□□□□ 0.28
SRPK1-201ENST00000346162 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
SRPK1-201ENST00000346162 SLC40A1Q9NP59 571 aa16.83■□□□□ 0.28
SRPK1-201ENST00000346162 TECPR2O15040 1411 aa16.83■□□□□ 0.28
SRPK1-201ENST00000346162 KRT15P19012 456 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 CDK8P49336 464 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 NT5C2P49902 561 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 IQCB1Q15051 598 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 ZC3H18Q86VM9 953 aaKnown RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 RETREG2Q8NC44 543 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 P3H4Q92791 437 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 NLRX1Q86UT6 975 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 KSR1Q8IVT5 923 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 CCT8L2Q96SF2 557 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 UBN2Q6ZU65 1347 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 H3BQF6 201 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 NDUFA10O95299 355 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 RCAN1P53805 252 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 PABPC4Q13310 644 aaKnown RBP eCLIP16.82■□□□□ 0.281e-15■□□□□ 11.1
SRPK1-201ENST00000346162 SDCCAG8Q86SQ7 713 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 OXER1Q8TDS5 423 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 GJA10Q969M2 543 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 CPDO75976 1380 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 hCG_1984214I3L0E3 225 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 TROVE2P10155 538 aaKnown RBP eCLIP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 ALAS1P13196 640 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 PLCG1P19174 1290 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 ABCB4P21439 1286 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 CCNE1P24864 410 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 FKBP3Q00688 224 aaKnown RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 LRRC41Q15345 812 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 ZNF713Q8N859 430 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 GPR101Q96P66 508 aaPredicted RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 IWS1Q96ST2 819 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 RNF14Q9UBS8 474 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 PAIP2BQ9ULR5 123 aaKnown RBP16.82■□□□□ 0.28
SRPK1-201ENST00000346162 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
SRPK1-201ENST00000346162 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 SPICE1Q8N0Z3 855 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 CENPKQ9BS16 269 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
SRPK1-201ENST00000346162 ASIC3Q9UHC3 531 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 EHHADHQ08426 723 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 SGSM3Q96HU1 749 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 POLD4Q9HCU8 107 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
SRPK1-201ENST00000346162 PTPROQ16827 1216 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 LIN9Q5TKA1 542 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms