RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 PLEKHG4Q58EX7 1191 aa23.16■■□□□ 1.3
KCNQ2-201ENST00000344425 FBXO22Q8NEZ5 403 aa23.16■■□□□ 1.3
KCNQ2-201ENST00000344425 NCOA7Q8NI08 942 aa23.16■■□□□ 1.3
KCNQ2-201ENST00000344425 SEPT8Q92599 483 aa23.16■■□□□ 1.3
KCNQ2-201ENST00000344425 CYTH3O43739 400 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 HOXC8P31273 242 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 ICAM3P32942 547 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 HTRA4P83105 476 aaPredicted RBP23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 TROAPQ12815 778 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 METTL7BQ6UX53 244 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 CATIPQ7Z7H3 387 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 INPP4AQ96PE3 977 aaPredicted RBP23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 RNPEPQ9H4A4 650 aa23.15■■□□□ 1.3
KCNQ2-201ENST00000344425 COL4A4P53420 1690 aaPredicted RBP23.14■■□□□ 1.3
KCNQ2-201ENST00000344425 TREHO43280 583 aa23.14■■□□□ 1.29
KCNQ2-201ENST00000344425 TTC22Q5TAA0 569 aa23.14■■□□□ 1.29
KCNQ2-201ENST00000344425 SAMD11Q96NU1 681 aa23.14■■□□□ 1.29
KCNQ2-201ENST00000344425 EPHX3Q9H6B9 360 aa23.14■■□□□ 1.29
KCNQ2-201ENST00000344425 UBE2ZQ9H832 354 aaPredicted RBP23.14■■□□□ 1.29
KCNQ2-201ENST00000344425 SPATA31C2B4DYI2 1134 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 FIBPO43427 364 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 MRPS9P82933 396 aaKnown RBP23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 MKRN4PQ13434 485 aaPredicted RBP23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 CYFIP1Q7L576 1253 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 SP7Q8TDD2 431 aaPredicted RBP23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 FAM122AQ96E09 287 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 C17orf80Q9BSJ5 609 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 ZNF215Q9UL58 517 aaPredicted RBP23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 FRMPD4Q14CM0 1322 aa23.13■■□□□ 1.29
KCNQ2-201ENST00000344425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 E7EWF7 191 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 PLA2G5P39877 138 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 PTH1RQ03431 593 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 PTPROQ16827 1216 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 CUL5Q93034 780 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 YME1L1Q96TA2 773 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 BCAS3Q9H6U6 928 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 RTEL1Q9NZ71 1219 aa23.12■■□□□ 1.29
KCNQ2-201ENST00000344425 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
KCNQ2-201ENST00000344425 TOP1MTQ969P6 601 aa23.11■■□□□ 1.29
KCNQ2-201ENST00000344425 GPR20Q99678 358 aa23.11■■□□□ 1.29
KCNQ2-201ENST00000344425 SETD4Q9NVD3 440 aa23.11■■□□□ 1.29
KCNQ2-201ENST00000344425 CTSHP09668 335 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 CHMLP26374 656 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 LEXMQ3ZCV2 418 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 TMEM31Q5JXX7 168 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 XRRA1Q6P2D8 792 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 PIBF1Q8WXW3 757 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 APBB2Q92870 758 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 MRPL38Q96DV4 380 aaKnown RBP23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 RRP36Q96EU6 259 aaKnown RBP23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 SENP7Q9BQF6 1050 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 LRFN3Q9BTN0 628 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 SIP14410 1827 aa23.1■■□□□ 1.29
KCNQ2-201ENST00000344425 BAZ2BQ9UIF8 2168 aaKnown RBP23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 PDE4AP27815 886 aa23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 EPC2Q52LR7 807 aa23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 PCNX4Q63HM2 1172 aa23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 NLRX1Q86UT6 975 aa23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 GIMAP8Q8ND71 665 aaPredicted RBP23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 CTCFLQ8NI51 663 aaPredicted RBP23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 YTHDC1Q96MU7 727 aaKnown RBP23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 MAP3K14Q99558 947 aa23.09■■□□□ 1.29
KCNQ2-201ENST00000344425 UPP2O95045 317 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 KCNA5P22460 613 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 KIF5BP33176 963 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 SEMA3FQ13275 785 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 UTP14CQ5TAP6 766 aaKnown RBP23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 IGDCC4Q8TDY8 1250 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 SEC63Q9UGP8 760 aaKnown RBP23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 HCN4Q9Y3Q4 1203 aa23.08■■□□□ 1.29
KCNQ2-201ENST00000344425 SMARCA1P28370 1054 aa23.08■■□□□ 1.28
KCNQ2-201ENST00000344425 ARHGAP4P98171 946 aa23.08■■□□□ 1.28
KCNQ2-201ENST00000344425 TIGD5Q53EQ6 642 aa23.08■■□□□ 1.28
KCNQ2-201ENST00000344425 ARIH1Q9Y4X5 557 aaPredicted RBP23.08■■□□□ 1.28
KCNQ2-201ENST00000344425 MICAL3Q7RTP6 2002 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 NRCAMQ92823 1304 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 H3BNC9 293 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 PUS10Q3MIT2 529 aaKnown RBP23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 FAM26DQ5JW98 314 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 USP17L6PQ6QN14 398 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 LZTS2Q9BRK4 669 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 IFIH1Q9BYX4 1025 aaKnown RBP23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 TAF6LQ9Y6J9 622 aa23.07■■□□□ 1.28
KCNQ2-201ENST00000344425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 RBAK-RBAKDNI3L0D1 243 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 SGSM2O43147 1006 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 GPR37L1O60883 481 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 DDAH1O94760 285 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 GNAQP50148 359 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 ANTXR2P58335 489 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 ADAM17P78536 824 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 SP4Q02446 784 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 GPM6BQ13491 265 aa23.06■■□□□ 1.28
KCNQ2-201ENST00000344425 FAM178BQ8IXR5 827 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms