RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 GDF6Q6KF10 455 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ZNF365Q70YC5 407 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 CAGE1Q8TC20 777 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ZNF274Q96GC6 653 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 GPR20Q99678 358 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 HDAC6Q9UBN7 1215 aa18.38■□□□□ 0.53
ATG4B-201ENST00000344376 ZNF215Q9UL58 517 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-201ENST00000344376 CPLX1O14810 134 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 FGBP02675 491 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 GNA11P29992 359 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 SP4Q02446 784 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 ZNF697Q5TEC3 545 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 FAM109BQ6ICB4 259 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-201ENST00000344376 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
ATG4B-201ENST00000344376 SCLYQ96I15 445 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
ATG4B-201ENST00000344376 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
ATG4B-201ENST00000344376 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-201ENST00000344376 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-201ENST00000344376 H3BRB1 525 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 NTRK3Q16288 839 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 Q7L0L9 218 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 BICD2Q8TD16 824 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 HERVK_113Q902F9 699 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 TUT1Q9H6E5 874 aaKnown RBP18.36■□□□□ 0.53
ATG4B-201ENST00000344376 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 SZT2Q5T011 3432 aa18.36■□□□□ 0.53
ATG4B-201ENST00000344376 KCNA2P16389 499 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 ZNF76P36508 570 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 SREBF1P36956 1147 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
ATG4B-201ENST00000344376 PKN1Q16512 942 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
ATG4B-201ENST00000344376 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 MXRA8Q9BRK3 442 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 TMEM260Q9NX78 707 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 PKD2L1Q9P0L9 805 aa18.35■□□□□ 0.53
ATG4B-201ENST00000344376 SSRP1Q08945 709 aaKnown RBP18.34■□□□□ 0.53
ATG4B-201ENST00000344376 PTK7Q13308 1070 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 CEP55Q53EZ4 464 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 UTP14CQ5TAP6 766 aaKnown RBP18.34■□□□□ 0.53
ATG4B-201ENST00000344376 RASIP1Q5U651 963 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 MYH7BA7E2Y1 1941 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 C17orf102A2RUQ5 167 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 ATP9AO75110 1047 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 IQCF3P0C7M6 154 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 ACTN1P12814 892 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 OTOP2Q7RTS6 562 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 SDF4Q9BRK5 362 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 KCNH7Q9NS40 1196 aa18.34■□□□□ 0.53
ATG4B-201ENST00000344376 PARNO95453 639 aaKnown RBP18.33■□□□□ 0.52
ATG4B-201ENST00000344376 SMIM10L2AP0DMW4 78 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 SMIM10L2BP0DMW5 78 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 GNAT1P11488 350 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 SELPP16109 830 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-201ENST00000344376 STK3Q13188 491 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 SEPT1Q8WYJ6 367 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 CTAGE1Q96RT6 745 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
ATG4B-201ENST00000344376 JPH1Q9HDC5 661 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-201ENST00000344376 SH3GLB2Q9NR46 395 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.52
ATG4B-201ENST00000344376 TMEM265A0A087WTH1 108 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 ZBBXA8MT70 800 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 CDKL5O76039 1030 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 DEXIO95424 95 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 RBL2Q08999 1139 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 LRRC8DQ7L1W4 858 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 TRIM50Q86XT4 487 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 ATP6V0A1Q93050 837 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 FTOQ9C0B1 505 aaKnown RBP eCLIP18.32■□□□□ 0.52
ATG4B-201ENST00000344376 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
ATG4B-201ENST00000344376 NFASCO94856 1347 aa18.31■□□□□ 0.52
ATG4B-201ENST00000344376 NLRP5P59047 1200 aa18.31■□□□□ 0.52
ATG4B-201ENST00000344376 CYP2W1Q8TAV3 490 aa18.31■□□□□ 0.52
ATG4B-201ENST00000344376 DHX38Q92620 1227 aaKnown RBP18.31■□□□□ 0.52
ATG4B-201ENST00000344376 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-201ENST00000344376 SLC9A2Q9UBY0 812 aa18.31■□□□□ 0.52
ATG4B-201ENST00000344376 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
ATG4B-201ENST00000344376 MEIS1O00470 390 aa18.3■□□□□ 0.52
ATG4B-201ENST00000344376 CYP3A4P08684 503 aa18.3■□□□□ 0.52
ATG4B-201ENST00000344376 CKBP12277 381 aa18.3■□□□□ 0.52
ATG4B-201ENST00000344376 DNAJB2P25686 324 aa18.3■□□□□ 0.52
ATG4B-201ENST00000344376 ZNF200P98182 395 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-201ENST00000344376 GLG1Q92896 1179 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms