RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 UBE2SQ16763 222 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 USP38Q8NB14 1042 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 RETREG2Q8NC44 543 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 NOD1Q9Y239 953 aa20.65■□□□□ 0.9
USF2-202ENST00000343550 IQCF3P0C7M6 154 aa20.64■□□□□ 0.9
USF2-202ENST00000343550 CCND2P30279 289 aa20.64■□□□□ 0.9
USF2-202ENST00000343550 RFC2P35250 354 aa20.64■□□□□ 0.9
USF2-202ENST00000343550 MRPS9P82933 396 aaKnown RBP20.64■□□□□ 0.9
USF2-202ENST00000343550 ME3Q16798 604 aa20.64■□□□□ 0.9
USF2-202ENST00000343550 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.9
USF2-202ENST00000343550 ZFP91Q96JP5 570 aaPredicted RBP20.64■□□□□ 0.9
USF2-202ENST00000343550 DDX41Q9UJV9 622 aaKnown RBP20.64■□□□□ 0.9
USF2-202ENST00000343550 ATP2A2P16615 1042 aaKnown RBP20.63■□□□□ 0.89
USF2-202ENST00000343550 BFSP2Q13515 415 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 CPLX2Q6PUV4 134 aaKnown RBP20.63■□□□□ 0.89
USF2-202ENST00000343550 TRIM22Q8IYM9 498 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 PCDHA6Q9UN73 950 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 PCDHA8Q9Y5H6 950 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 PCDHA11Q9Y5I1 949 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 CHD9Q3L8U1 2897 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 ADCY7P51828 1080 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 PTGISQ16647 500 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 DGKDQ16760 1214 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 KAT2BQ92831 832 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 EMID1Q96A84 441 aaPredicted RBP20.63■□□□□ 0.89
USF2-202ENST00000343550 ZMYND12Q9H0C1 365 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
USF2-202ENST00000343550 MRVI1Q9Y6F6 885 aa20.63■□□□□ 0.89
USF2-202ENST00000343550 KIAA1217Q5T5P2 1943 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 SPDYE3A6NKU9 549 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 ACTN1P12814 892 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 MYOGP15173 224 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 CLK2P49760 499 aaKnown RBP20.62■□□□□ 0.89
USF2-202ENST00000343550 ADGRE1Q14246 886 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 PCNX4Q63HM2 1172 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 XRRA1Q6P2D8 792 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 SESTD1Q86VW0 696 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 CCDC12Q8WUD4 166 aaPredicted RBP20.62■□□□□ 0.89
USF2-202ENST00000343550 RTEL1Q9NZ71 1219 aa20.62■□□□□ 0.89
USF2-202ENST00000343550 ESYT2A0FGR8 921 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 STAM2O75886 525 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 DEXIO95424 95 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 LARGE1O95461 756 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 LAMC2Q13753 1193 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
USF2-202ENST00000343550 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 PPM1EQ8WY54 764 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 CTAGE1Q96RT6 745 aa20.61■□□□□ 0.89
USF2-202ENST00000343550 FTOQ9C0B1 505 aaKnown RBP eCLIP20.61■□□□□ 0.89
USF2-202ENST00000343550 ADAMTS3O15072 1205 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 CDKL5O76039 1030 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 CTDNEP1O95476 244 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 FOSP01100 380 aaPredicted RBP20.6■□□□□ 0.89
USF2-202ENST00000343550 TGFB3P10600 412 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 IGFBP4P22692 258 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 PPP2R2DQ66LE6 453 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 KCNV1Q6PIU1 500 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 DHX37Q8IY37 1157 aaKnown RBP20.6■□□□□ 0.89
USF2-202ENST00000343550 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 PPTC7Q8NI37 304 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 INPP4AQ96PE3 977 aaPredicted RBP20.6■□□□□ 0.89
USF2-202ENST00000343550 C6orf50Q9HD87 102 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 SH3GLB2Q9NR46 395 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
USF2-202ENST00000343550 GNA11P29992 359 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 SP2Q02086 613 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 CAGE1Q8TC20 777 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 SYMPKQ92797 1274 aaKnown RBP20.59■□□□□ 0.89
USF2-202ENST00000343550 BACH2Q9BYV9 841 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 TMEM260Q9NX78 707 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 VPS54Q9P1Q0 977 aa20.59■□□□□ 0.89
USF2-202ENST00000343550 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 DTNBO60941 627 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 ICAM3P32942 547 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 C7orf31Q8N865 590 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 PHOSPHO2Q8TCD6 241 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 AFAP1L1Q8TED9 768 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 GTF3C6Q969F1 213 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 KATNAL1Q9BW62 490 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 PRDM6Q9NQX0 595 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 HDAC6Q9UBN7 1215 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 GTF2IRD1Q9UHL9 959 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 CHD7Q9P2D1 2997 aa20.58■□□□□ 0.89
USF2-202ENST00000343550 PSEN2P49810 448 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 AP3B2Q13367 1082 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 GNPTABQ3T906 1256 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 MYSM1Q5VVJ2 828 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 JAKMIP3Q5VZ66 844 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 CCDC148Q8NFR7 591 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 PGBD1Q96JS3 809 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 TBC1D32Q96NH3 1257 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 AIFM3Q96NN9 605 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 SLC9A7Q96T83 725 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 ALG1Q9BT22 464 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 EHMT1Q9H9B1 1298 aa20.58■□□□□ 0.88
USF2-202ENST00000343550 SCN5AQ14524 2016 aa20.57■□□□□ 0.88
USF2-202ENST00000343550 SPTBN5Q9NRC6 3674 aaKnown RBP20.57■□□□□ 0.88
USF2-202ENST00000343550 MYO9BQ13459 2157 aa20.57■□□□□ 0.88
USF2-202ENST00000343550 PPFIA4O75335 1185 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms