RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 WNT8BQ93098 351 aa11.65□□□□□ -0.54
SNRPD2-201ENST00000342669 RRP36Q96EU6 259 aaKnown RBP11.65□□□□□ -0.54
SNRPD2-201ENST00000342669 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
SNRPD2-201ENST00000342669 COG5Q9UP83 839 aa11.65□□□□□ -0.54
SNRPD2-201ENST00000342669 TAF6LQ9Y6J9 622 aa11.65□□□□□ -0.54
SNRPD2-201ENST00000342669 RSPH10B2B2RC85 870 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 DDAH1O94760 285 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 LGALS2P05162 132 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 RSPH10BP0C881 870 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 SMIM10L2AP0DMW4 78 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 SMIM10L2BP0DMW5 78 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 BMP1P13497 986 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 ICAM3P32942 547 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 MRPS9P82933 396 aaKnown RBP11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 HIC1Q14526 733 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 MBTPS1Q14703 1052 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 TCTN1Q2MV58 587 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 CASC1Q6TDU7 716 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 METTL7BQ6UX53 244 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 ZNF654Q8IZM8 581 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 TGS1Q96RS0 853 aaKnown RBP11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 RTEL1Q9NZ71 1219 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 SEC63Q9UGP8 760 aaKnown RBP11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 RBM8AQ9Y5S9 174 aaKnown RBP11.64□□□□□ -0.55
SNRPD2-201ENST00000342669 FRMPD4Q14CM0 1322 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 FIBPO43427 364 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 LPXNO60711 386 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 AMHP03971 560 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 GNAT1P11488 350 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 SMARCA1P28370 1054 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 GNAQP50148 359 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 KCNQ1P51787 676 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 ANTXR2P58335 489 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 ERVK-21P61565 698 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 SPRED2Q7Z698 418 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 DBF4BQ8NFT6 615 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 HLA-CQ95604 372 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 NECAB3Q96P71 396 aaPredicted RBP11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 INPP4AQ96PE3 977 aaPredicted RBP11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 SPZ1Q9BXG8 430 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 BCAS3Q9H6U6 928 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 LY9Q9HBG7 655 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 MTUS1Q9ULD2 1270 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 INSL6Q9Y581 213 aa11.63□□□□□ -0.55
SNRPD2-201ENST00000342669 BRWD1Q9NSI6 2320 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 LINC01553A4QN01 128 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 CCDC69A6NI79 296 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 TREHO43280 583 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 CAND2O75155 1236 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 HOXC8P31273 242 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 MCM5P33992 734 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 PLEKHG4Q58EX7 1191 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 UTP14CQ5TAP6 766 aaKnown RBP11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 PCNX4Q63HM2 1172 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 GIMAP8Q8ND71 665 aaPredicted RBP11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 SEPT8Q92599 483 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 GPR20Q99678 358 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 MYL10Q9BUA6 226 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
SNRPD2-201ENST00000342669 NLRC5Q86WI3 1866 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 PRC1O43663 620 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 CALM1P0DP23 149 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 CALM2P0DP24 149 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 CALM3P0DP25 149 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 COL9A1P20849 921 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 IRX6P78412 446 aaPredicted RBP11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 SP4Q02446 784 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 SENP7Q9BQF6 1050 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 SETD4Q9NVD3 440 aa11.61□□□□□ -0.55
SNRPD2-201ENST00000342669 SH2B2O14492 632 aaPredicted RBP11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 MEIS2O14770 477 aa11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 PLEKHA8P1O95397 391 aa11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 CTSHP09668 335 aa11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 HTRA4P83105 476 aaPredicted RBP11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 ARHGAP4P98171 946 aa11.6□□□□□ -0.55
SNRPD2-201ENST00000342669 TRIM50Q86XT4 487 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms