RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 PCDHAC2Q9Y5I4 1007 aa8.05□□□□□ -1.12
PTPRR-202ENST00000342084 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 LCA5LO95447 670 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 SERPINB2P05120 415 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 TUBBP07437 444 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 NOVP48745 357 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
PTPRR-202ENST00000342084 LRRC63Q05C16 580 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 GABPAQ06546 454 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 RAPGEF1Q13905 1077 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 ASTE1Q2TB18 679 aaPredicted RBP8.04□□□□□ -1.12
PTPRR-202ENST00000342084 MAP9Q49MG5 647 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 ZCWPW2Q504Y3 356 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 ASPRV1Q53RT3 343 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 DNAJC21Q5F1R6 531 aaKnown RBP8.04□□□□□ -1.12
PTPRR-202ENST00000342084 FAM26FQ5R3K3 315 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 CCDC181Q5TID7 509 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 C15orf52Q6ZUT6 534 aaKnown RBP8.04□□□□□ -1.12
PTPRR-202ENST00000342084 RPGRIP1Q96KN7 1286 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 TSG101Q99816 390 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 TLR10Q9BXR5 811 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 BCAS3Q9H6U6 928 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 VIPAS39Q9H9C1 493 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 RSPH14Q9UHP6 348 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 RRP15Q9Y3B9 282 aaKnown RBP8.04□□□□□ -1.12
PTPRR-202ENST00000342084 HYOU1Q9Y4L1 999 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 COL4A3BPQ9Y5P4 624 aa8.04□□□□□ -1.12
PTPRR-202ENST00000342084 IGKV6D-41A0A0C4DH26 115 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MYO1CO00159 1063 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MEIS1O00470 390 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PALMO75781 387 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 POTEIP0CG38 1075 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 SNHG28P0DPA3 235 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 ACTN1P12814 892 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 GYS1P13807 737 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PLCG2P16885 1265 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 SHMT1P34896 483 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 NT5C2P49902 561 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 CASP5P51878 434 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 NFIAQ12857 509 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 FAM83BQ5T0W9 1011 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 KLHDC7AQ5VTJ3 777 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 POTEGQ6S5H5 508 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 POTEEQ6S8J3 1075 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 SRLQ86TD4 932 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 GPBP1Q86WP2 473 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MMGT1Q8N4V1 131 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 FAM133AQ8N9E0 248 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 RBM17Q96I25 401 aaKnown RBP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 ALS2CR12Q96Q35 445 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 P2RX7Q99572 595 aaKnown RBP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 RAB34Q9BZG1 259 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 GOLPH3Q9H4A6 298 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 USP40Q9NVE5 1235 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 CWC15Q9P013 229 aaKnown RBP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PCDHA12Q9UN75 941 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 GOLGA6BA6NDN3 693 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MED24O75448 989 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 TTLL1O95922 423 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PLA2G4BP0C869 781 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MCM3P25205 808 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 SMARCA1P28370 1054 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PSMC6P62333 389 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 DDR1Q08345 913 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PDIA5Q14554 519 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 TRADDQ15628 312 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 CRY2Q49AN0 593 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 HERC4Q5GLZ8 1057 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 SFMBT2Q5VUG0 894 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 GOLGA6L1Q8N7Z2 621 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PROCA1Q8NCQ7 364 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-202ENST00000342084 TBC1D5Q92609 795 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 CUL5Q93034 780 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 IKZF4Q9H2S9 585 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 PSTPIP2Q9H939 334 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
PTPRR-202ENST00000342084 MYH7BA7E2Y1 1941 aa8.02□□□□□ -1.12
PTPRR-202ENST00000342084 PLIN4Q96Q06 1357 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 A0A087X0T9 212 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 PJA2O43164 708 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 FGFR1OPO95684 399 aaKnown RBP8.02□□□□□ -1.13
PTPRR-202ENST00000342084 FAM153BP0C7A2 387 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 FAM228BP0C875 321 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 KLRC1P26715 233 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 FKBP3Q00688 224 aaKnown RBP8.02□□□□□ -1.13
PTPRR-202ENST00000342084 PPARDQ03181 441 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 TCP10Q12799 353 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 ORC2Q13416 577 aaPredicted RBP8.02□□□□□ -1.13
PTPRR-202ENST00000342084 QRICH1Q2TAL8 776 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 FAM153CQ494X1 144 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 SLC9C1Q4G0N8 1177 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 ARSHQ5FYA8 562 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 PPP4R3AQ6IN85 833 aa8.02□□□□□ -1.13
PTPRR-202ENST00000342084 IQCEQ6IPM2 695 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms