RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
HIPK1-201ENST00000340480 HLTFQ14527 1009 aaKnown RBP eCLIP8.34□□□□□ -1.07
HIPK1-201ENST00000340480 ODR4Q5SWX8 454 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 AFPP02771 609 aaKnown RBP8.34□□□□□ -1.07
HIPK1-201ENST00000340480 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 HACE1Q8IYU2 909 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 ARFGAP2Q8N6H7 521 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 TUFT1Q9NNX1 390 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 HSF2BPO75031 334 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 RBL2Q08999 1139 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 C6orf163Q5TEZ5 329 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 GMCL1P1Q8NEA9 526 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 ACCSQ96QU6 501 aa8.34□□□□□ -1.07
HIPK1-201ENST00000340480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
HIPK1-201ENST00000340480 NDUFB10O96000 172 aa8.34□□□□□ -1.08
HIPK1-201ENST00000340480 PRELPP51888 382 aa8.34□□□□□ -1.08
HIPK1-201ENST00000340480 PKN1Q16512 942 aa8.34□□□□□ -1.08
HIPK1-201ENST00000340480 FAM160B1Q5W0V3 765 aa8.34□□□□□ -1.08
HIPK1-201ENST00000340480 NRBP2Q9NSY0 501 aa8.34□□□□□ -1.08
HIPK1-201ENST00000340480 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.08
HIPK1-201ENST00000340480 CCND2P30279 289 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 DDR1Q08345 913 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 TKFCQ3LXA3 575 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SPICE1Q8N0Z3 855 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 GIMAP8Q8ND71 665 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 K7ENM7 598 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SCP2P22307 547 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ARID5AQ03989 594 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 DMP1Q13316 513 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 NT5DC1Q5TFE4 455 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 TRMT1LQ7Z2T5 733 aaKnown RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 VCPKMTQ9H867 229 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ZBTB21Q9ULJ3 1066 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ANO9A1A5B4 782 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 CCNA1P78396 465 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 XKR9Q5GH70 373 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 GABPB2Q8TAK5 448 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 H2AFZP0C0S5 128 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 GABPB1Q06547 395 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 H2AFVQ71UI9 128 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 POTEDQ86YR6 584 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 TMX1Q9H3N1 280 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ZNF215Q9UL58 517 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 NHSL1Q5SYE7 1610 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 CDC25AP30304 524 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 EPHA7Q15375 998 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SPOUT1Q5T280 376 aaKnown RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 LIN9Q5TKA1 542 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 STMN4Q9H169 189 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 PKD2L1Q9P0L9 805 aa8.33□□□□□ -1.08
HIPK1-201ENST00000340480 ZNF70Q9UC06 446 aaPredicted RBP8.33□□□□□ -1.08
HIPK1-201ENST00000340480 SHTN1A0MZ66 631 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 PRCPP42785 496 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 BPIFB4P59827 614 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 EDRF1Q3B7T1 1238 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 FAM83AQ86UY5 434 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TYW1Q9NV66 732 aaKnown RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TBC1D7Q9P0N9 293 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ODF2LQ9ULJ1 636 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 PRR29P0C7W0 189 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 LMNB1P20700 586 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TOB1P50616 345 aaPredicted RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CYP4A11Q02928 519 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 C8orf74Q6P047 294 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 MCPH1Q8NEM0 835 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 UBE4BO95155 1302 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 NDUFA10O95299 355 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 EYA4O95677 639 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 TGFB2P61812 414 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 RPS6KA1Q15418 735 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 SEL1L2Q5TEA6 688 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 SRGAP1Q7Z6B7 1085 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ZBTB8OSQ8IWT0 167 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 DEPTORQ8TB45 409 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CFAP57Q96MR6 1250 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 HOXC10Q9NYD6 342 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 IREB2P48200 963 aaKnown RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CACNB3P54284 484 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 PRPF4BQ13523 1007 aaKnown RBP8.32□□□□□ -1.08
HIPK1-201ENST00000340480 FAM83BQ5T0W9 1011 aa8.32□□□□□ -1.08
HIPK1-201ENST00000340480 CFAP58Q5T655 872 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms