RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MFSD10Q14728 455 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 PTGISQ16647 500 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 UBE2SQ16763 222 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 TMEM240Q5SV17 173 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 RNF26Q9BY78 433 aaPredicted RBP15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 RTEL1Q9NZ71 1219 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 GTF2IRD1Q9UHL9 959 aa15.27■□□□□ 0.04
SIRPB3P-201ENST00000340424 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 SMCO2A6NFE2 343 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 PARNO95453 639 aaKnown RBP15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 IFNAR1P17181 557 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 SEMA3FQ13275 785 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 MTMR1Q13613 665 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 RASIP1Q5U651 963 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 AFAP1L1Q8TED9 768 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 WNT8AQ9H1J5 351 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZNF215Q9UL58 517 aaPredicted RBP15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 UBIAD1Q9Y5Z9 338 aa15.26■□□□□ 0.03
SIRPB3P-201ENST00000340424 UMODL1Q5DID0 1318 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 FGBP02675 491 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 CYP2C9P11712 490 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 ITGB5P18084 799 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 GNA11P29992 359 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 PDIA3P30101 505 aaKnown RBP15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 CHMP4BP1P59074 171 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 RBL2Q08999 1139 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZNF697Q5TEC3 545 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 C16orf59Q7L2K0 433 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 CYFIP1Q7L576 1253 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 FAM177A1Q8N128 213 aaPredicted RBP15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZFP91Q96JP5 570 aaPredicted RBP15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 C6orf50Q9HD87 102 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 TANC1Q9C0D5 1861 aa15.25■□□□□ 0.03
SIRPB3P-201ENST00000340424 H3BRB1 525 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 LGALS2P05162 132 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 SREBF1P36956 1147 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 CLK2P49760 499 aaKnown RBP15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 CCL23P55773 120 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 PTK7Q13308 1070 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 NTRK3Q16288 839 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 TRIM22Q8IYM9 498 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 BICD2Q8TD16 824 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 GPR20Q99678 358 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 ANO3Q9BYT9 981 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 ZMYND12Q9H0C1 365 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 TUT1Q9H6E5 874 aaKnown RBP15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
SIRPB3P-201ENST00000340424 ACRP10323 421 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 GNAT1P11488 350 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 ACTN1P12814 892 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 KCNA2P16389 499 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 CEP55Q53EZ4 464 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 MXRA8Q9BRK3 442 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 MTMR10Q9NXD2 777 aa15.23■□□□□ 0.03
SIRPB3P-201ENST00000340424 CPLX1O14810 134 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 SORBS3O60504 671 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 IQCF3P0C7M6 154 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 PYGBP11216 843 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 HOXC8P31273 242 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 ANKRD1Q15327 319 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 PKN1Q16512 942 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 IL17RAQ96F46 866 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 SCLYQ96I15 445 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 CTAGE1Q96RT6 745 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
SIRPB3P-201ENST00000340424 NFASCO94856 1347 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 C17orf102A2RUQ5 167 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 CAND2O75155 1236 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 CDKL5O76039 1030 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 SELPP16109 830 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 Q7L0L9 218 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 PHKBQ93100 1093 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 KCNH7Q9NS40 1196 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms