RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
CSRP1-201ENST00000340006 SP2Q02086 613 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 TRIB2Q92519 343 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 RIT2Q99578 217 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
CSRP1-201ENST00000340006 CNGA1P29973 690 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 LBX1P52954 281 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 GRIN1Q05586 938 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 PDIA5Q14554 519 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 CYFIP1Q7L576 1253 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 GIMAP8Q8ND71 665 aaPredicted RBP16.63■□□□□ 0.25
CSRP1-201ENST00000340006 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 LRWD1Q9UFC0 647 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
CSRP1-201ENST00000340006 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
CSRP1-201ENST00000340006 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 CHMP2AO43633 222 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 ADCYAP1R1P41586 468 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 SP4Q02446 784 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 ITGB3BPQ13352 177 aaPredicted RBP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 NEDD9Q14511 834 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 DHX37Q8IY37 1157 aaKnown RBP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 PSMD10O75832 226 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 KCNA2P16389 499 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 CDC25AP30304 524 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 UBE2HP62256 183 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 BCAS3Q9H6U6 928 aa16.62■□□□□ 0.25
CSRP1-201ENST00000340006 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
CSRP1-201ENST00000340006 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
CSRP1-201ENST00000340006 HSPA8P11142 646 aaKnown RBP16.61■□□□□ 0.25
CSRP1-201ENST00000340006 UBA7P41226 1012 aa16.61■□□□□ 0.25
CSRP1-201ENST00000340006 TNFAIP2Q03169 654 aa16.61■□□□□ 0.25
CSRP1-201ENST00000340006 ZRSR1Q15695 479 aaKnown RBP16.61■□□□□ 0.25
CSRP1-201ENST00000340006 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
CSRP1-201ENST00000340006 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
CSRP1-201ENST00000340006 PXYLP1Q8TE99 480 aa16.61■□□□□ 0.25
CSRP1-201ENST00000340006 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
CSRP1-201ENST00000340006 POTEMA6NI47 508 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 ARIH2O95376 493 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 GGPS1O95749 300 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 MBD3O95983 291 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 CACNB2Q08289 660 aaPredicted RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 TRIM32Q13049 653 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 RASSF8Q8NHQ8 419 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 AK8Q96MA6 479 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 PANK2Q9BZ23 570 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 JPH1Q9HDC5 661 aaPredicted RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 SLC9A2Q9UBY0 812 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 FAM184BQ9ULE4 1060 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 HMGCRP04035 888 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 UBA1P22314 1058 aaKnown RBP16.6■□□□□ 0.25
CSRP1-201ENST00000340006 CMA1P23946 247 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 GRK4P32298 578 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 TMEM63BQ5T3F8 832 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 CCDC62Q6P9F0 684 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 MIER3Q7Z3K6 550 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 IGSF22Q8N9C0 903 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 COPS5Q92905 334 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
CSRP1-201ENST00000340006 NFASCO94856 1347 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 PP2D1A8MPX8 630 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 TXLNAP40222 546 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 KRT76Q01546 638 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 PPP2R5CQ13362 524 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 CELF3Q5SZQ8 465 aaKnown RBP16.59■□□□□ 0.25
CSRP1-201ENST00000340006 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 ERMNQ8TAM6 284 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
CSRP1-201ENST00000340006 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
CSRP1-201ENST00000340006 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.25
CSRP1-201ENST00000340006 SMPD1P17405 629 aa16.58■□□□□ 0.25
CSRP1-201ENST00000340006 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.25
CSRP1-201ENST00000340006 GJC2Q5T442 439 aaPredicted RBP16.58■□□□□ 0.25
CSRP1-201ENST00000340006 USP49Q70CQ1 688 aa16.58■□□□□ 0.25
CSRP1-201ENST00000340006 FSIP1Q8NA03 581 aa16.58■□□□□ 0.25
CSRP1-201ENST00000340006 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
CSRP1-201ENST00000340006 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms