RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 APBB2Q92870 758 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 YME1L1Q96TA2 773 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 LZTS2Q9BRK4 669 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 HCN4Q9Y3Q4 1203 aa16.41■□□□□ 0.22
COMMD4-202ENST00000338995 TREHO43280 583 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 KIF5BP33176 963 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 HTRA4P83105 476 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 MBTPS1Q14703 1052 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 SPRED2Q7Z698 418 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 IL31RAQ8NI17 732 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 WNT8BQ93098 351 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 ZFP91Q96JP5 570 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 SENP7Q9BQF6 1050 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 EPHX3Q9H6B9 360 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 UBE2ZQ9H832 354 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
COMMD4-202ENST00000338995 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 ARIH1Q9Y4X5 557 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-202ENST00000338995 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-202ENST00000338995 CYP21A2P08686 494 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 SMARCA1P28370 1054 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 PLA2G5P39877 138 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 GNAQP50148 359 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 TROAPQ12815 778 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 TCTN1Q2MV58 587 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 TTC22Q5TAA0 569 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 RSPH3Q86UC2 560 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
COMMD4-202ENST00000338995 CDHR1Q96JP9 859 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
COMMD4-202ENST00000338995 RAPGEFL1Q9UHV5 662 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 FAM50BQ9Y247 325 aa16.39■□□□□ 0.21
COMMD4-202ENST00000338995 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 E7EWF7 191 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 CYTH3O43739 400 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 UPP2O95045 317 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
COMMD4-202ENST00000338995 HIC1Q14526 733 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 TIGD5Q53EQ6 642 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
COMMD4-202ENST00000338995 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
COMMD4-202ENST00000338995 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
COMMD4-202ENST00000338995 GPR20Q99678 358 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 C17orf80Q9BSJ5 609 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 LRFN3Q9BTN0 628 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 SETD4Q9NVD3 440 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
COMMD4-202ENST00000338995 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
COMMD4-202ENST00000338995 NCK2O43639 380 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 GPR37L1O60883 481 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 KCNA5P22460 613 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 CHMLP26374 656 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 HOXC8P31273 242 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 ARHGAP4P98171 946 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 GPM6BQ13491 265 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 TAF2Q6P1X5 1199 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
COMMD4-202ENST00000338995 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
COMMD4-202ENST00000338995 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
COMMD4-202ENST00000338995 H3BNC9 293 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 DDAH1O94760 285 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 CTSHP09668 335 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 SSTR3P32745 418 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-202ENST00000338995 PTH1RQ03431 593 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 FAM26DQ5JW98 314 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 NFXL1Q6ZNB6 911 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 TMEM192Q8IY95 271 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 GJD3Q8N144 294 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 BANK1Q8NDB2 785 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
COMMD4-202ENST00000338995 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 TRANK1O15050 2925 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 FRMPD4Q14CM0 1322 aa16.36■□□□□ 0.21
COMMD4-202ENST00000338995 BDP1A6H8Y1 2624 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 MUC3AQ02505 3323 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 PI4K2BG5E9Z4 385 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 RPLP2P05387 115 aaKnown RBP16.35■□□□□ 0.21
COMMD4-202ENST00000338995 RB1P06400 928 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 ALADP13716 330 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 SP4Q02446 784 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
COMMD4-202ENST00000338995 PTCRAQ6ISU1 281 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-202ENST00000338995 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms